Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
DDX1Q92499 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DDX1Q92499 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.11■□□□□ 0.17
DDX1Q92499 ACKR1-201ENST00000368121 1240 ntBASIC16.11■□□□□ 0.17
DDX1Q92499 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.11■□□□□ 0.17
DDX1Q92499 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.11■□□□□ 0.17
DDX1Q92499 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.11■□□□□ 0.17
DDX1Q92499 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.11■□□□□ 0.17
DDX1Q92499 AL355994.2-201ENST00000447882 704 ntBASIC16.11■□□□□ 0.17
DDX1Q92499 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.11■□□□□ 0.17
DDX1Q92499 BNIP3P42-201ENST00000454982 569 ntBASIC16.11■□□□□ 0.17
DDX1Q92499 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DDX1Q92499 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DDX1Q92499 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.11■□□□□ 0.17
DDX1Q92499 AC026434.2-201ENST00000506094 1078 ntBASIC16.11■□□□□ 0.17
DDX1Q92499 ENPP7P5-201ENST00000541031 1031 ntBASIC16.11■□□□□ 0.17
DDX1Q92499 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DDX1Q92499 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.11■□□□□ 0.17
DDX1Q92499 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.11■□□□□ 0.17
DDX1Q92499 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.11■□□□□ 0.17
DDX1Q92499 BNIP3P29-201ENST00000598302 571 ntBASIC16.11■□□□□ 0.17
DDX1Q92499 AP005019.2-201ENST00000615104 511 ntBASIC16.11■□□□□ 0.17
DDX1Q92499 AC011447.5-201ENST00000616168 564 ntBASIC16.11■□□□□ 0.17
DDX1Q92499 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.11■□□□□ 0.17
DDX1Q92499 RPSAP52-203ENST00000622976 1023 ntBASIC16.11■□□□□ 0.17
DDX1Q92499 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.11■□□□□ 0.17
DDX1Q92499 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
DDX1Q92499 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.11■□□□□ 0.17
DDX1Q92499 AL009178.2-201ENST00000597278 2719 ntBASIC16.11■□□□□ 0.17
DDX1Q92499 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DDX1Q92499 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
DDX1Q92499 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.11■□□□□ 0.17
DDX1Q92499 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DDX1Q92499 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
DDX1Q92499 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DDX1Q92499 AC113367.3-201ENST00000508316 1912 ntBASIC16.11■□□□□ 0.17
DDX1Q92499 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DDX1Q92499 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DDX1Q92499 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DDX1Q92499 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DDX1Q92499 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
DDX1Q92499 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.11■□□□□ 0.17
DDX1Q92499 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
DDX1Q92499 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
DDX1Q92499 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
DDX1Q92499 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DDX1Q92499 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
DDX1Q92499 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DDX1Q92499 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
DDX1Q92499 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
DDX1Q92499 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DDX1Q92499 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DDX1Q92499 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.1■□□□□ 0.17
DDX1Q92499 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
DDX1Q92499 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DDX1Q92499 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DDX1Q92499 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.1■□□□□ 0.17
DDX1Q92499 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.1■□□□□ 0.17
DDX1Q92499 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.1■□□□□ 0.17
DDX1Q92499 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.1■□□□□ 0.17
DDX1Q92499 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.1■□□□□ 0.17
DDX1Q92499 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.1■□□□□ 0.17
DDX1Q92499 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.1■□□□□ 0.17
DDX1Q92499 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.1■□□□□ 0.17
DDX1Q92499 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
DDX1Q92499 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DDX1Q92499 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
DDX1Q92499 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DDX1Q92499 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.1■□□□□ 0.17
DDX1Q92499 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
DDX1Q92499 AP001267.2-201ENST00000532619 2086 ntBASIC16.1■□□□□ 0.17
DDX1Q92499 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DDX1Q92499 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DDX1Q92499 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DDX1Q92499 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DDX1Q92499 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DDX1Q92499 AC018665.1-201ENST00000622927 1362 ntBASIC16.1■□□□□ 0.17
DDX1Q92499 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.1■□□□□ 0.17
DDX1Q92499 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
DDX1Q92499 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
DDX1Q92499 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.1■□□□□ 0.17
DDX1Q92499 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
DDX1Q92499 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DDX1Q92499 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
DDX1Q92499 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.1■□□□□ 0.17
DDX1Q92499 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
DDX1Q92499 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.09■□□□□ 0.17
DDX1Q92499 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DDX1Q92499 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.09■□□□□ 0.17
DDX1Q92499 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
DDX1Q92499 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
DDX1Q92499 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
DDX1Q92499 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DDX1Q92499 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
DDX1Q92499 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
DDX1Q92499 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
DDX1Q92499 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.09■□□□□ 0.17
DDX1Q92499 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DDX1Q92499 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DDX1Q92499 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms