Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 RPL5P21-201ENST00000404620 815 ntBASIC13.21□□□□□ -0.29
CCDC107Q8WV48 AC004461.1-201ENST00000412461 403 ntBASIC13.21□□□□□ -0.29
CCDC107Q8WV48 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 RBPMS2P1-201ENST00000437762 623 ntBASIC13.21□□□□□ -0.29
CCDC107Q8WV48 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 AC084121.4-201ENST00000641598 221 ntBASIC13.21□□□□□ -0.29
CCDC107Q8WV48 AF228730.8-201ENST00000642140 221 ntBASIC13.21□□□□□ -0.29
CCDC107Q8WV48 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.21□□□□□ -0.29
CCDC107Q8WV48 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CCDC107Q8WV48 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.21□□□□□ -0.3
CCDC107Q8WV48 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.3
CCDC107Q8WV48 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.3
CCDC107Q8WV48 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CCDC107Q8WV48 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.21□□□□□ -0.3
CCDC107Q8WV48 AC113367.3-201ENST00000508316 1912 ntBASIC13.21□□□□□ -0.3
CCDC107Q8WV48 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
CCDC107Q8WV48 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
CCDC107Q8WV48 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.21□□□□□ -0.3
CCDC107Q8WV48 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CCDC107Q8WV48 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
CCDC107Q8WV48 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CCDC107Q8WV48 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CCDC107Q8WV48 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.21□□□□□ -0.3
CCDC107Q8WV48 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 ACE3P-201ENST00000423435 1973 ntBASIC13.2□□□□□ -0.3
CCDC107Q8WV48 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 AZGP1P1-201ENST00000411909 902 ntBASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms