Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 AL009178.2-201ENST00000597278 2719 ntBASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 AC114812.1-204ENST00000449669 728 ntBASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 AC007191.1-201ENST00000623179 2995 ntBASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH19Q8TAB3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDH19Q8TAB3 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
PCDH19Q8TAB3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
PCDH19Q8TAB3 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.64■□□□□ 0.09
PCDH19Q8TAB3 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDH19Q8TAB3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDH19Q8TAB3 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.64■□□□□ 0.09
PCDH19Q8TAB3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDH19Q8TAB3 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDH19Q8TAB3 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDH19Q8TAB3 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDH19Q8TAB3 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDH19Q8TAB3 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDH19Q8TAB3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDH19Q8TAB3 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
PCDH19Q8TAB3 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDH19Q8TAB3 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
PCDH19Q8TAB3 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.64■□□□□ 0.09
PCDH19Q8TAB3 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.64■□□□□ 0.09
PCDH19Q8TAB3 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDH19Q8TAB3 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
PCDH19Q8TAB3 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.64■□□□□ 0.09
PCDH19Q8TAB3 ENPP7P5-201ENST00000541031 1031 ntBASIC15.64■□□□□ 0.09
PCDH19Q8TAB3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.64■□□□□ 0.09
PCDH19Q8TAB3 IGHV3-72-202ENST00000621503 303 ntBASIC15.64■□□□□ 0.09
PCDH19Q8TAB3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDH19Q8TAB3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
PCDH19Q8TAB3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDH19Q8TAB3 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDH19Q8TAB3 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDH19Q8TAB3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDH19Q8TAB3 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDH19Q8TAB3 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDH19Q8TAB3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDH19Q8TAB3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDH19Q8TAB3 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PCDH19Q8TAB3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms