Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 AC012441.1-201ENST00000446669 685 ntBASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 AC093433.1-201ENST00000458048 571 ntBASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 MFF-223ENST00000524634 647 ntTSL 2 BASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 AL033527.4-201ENST00000641026 673 ntBASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 AC007326.2-201ENST00000624224 7579 ntBASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CLDND2Q8NHS1 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDND2Q8NHS1 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CLDND2Q8NHS1 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDND2Q8NHS1 MSTO2P-201ENST00000314835 1709 ntBASIC12.96□□□□□ -0.33
CLDND2Q8NHS1 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC12.96□□□□□ -0.33
CLDND2Q8NHS1 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.96□□□□□ -0.33
CLDND2Q8NHS1 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
CLDND2Q8NHS1 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDND2Q8NHS1 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CLDND2Q8NHS1 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.96□□□□□ -0.33
CLDND2Q8NHS1 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CLDND2Q8NHS1 AL390755.1-201ENST00000623716 2027 ntBASIC12.96□□□□□ -0.33
CLDND2Q8NHS1 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.96□□□□□ -0.33
CLDND2Q8NHS1 AL365209.1-201ENST00000624418 6473 ntBASIC12.96□□□□□ -0.33
CLDND2Q8NHS1 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDND2Q8NHS1 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDND2Q8NHS1 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.96□□□□□ -0.33
CLDND2Q8NHS1 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CLDND2Q8NHS1 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDND2Q8NHS1 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDND2Q8NHS1 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDND2Q8NHS1 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CLDND2Q8NHS1 STX1A-203ENST00000395155 783 ntTSL 2 BASIC12.96□□□□□ -0.33
CLDND2Q8NHS1 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.96□□□□□ -0.33
CLDND2Q8NHS1 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.96□□□□□ -0.33
CLDND2Q8NHS1 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CLDND2Q8NHS1 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.96□□□□□ -0.33
CLDND2Q8NHS1 AP001582.1-201ENST00000525856 295 ntBASIC12.96□□□□□ -0.33
CLDND2Q8NHS1 AC093813.1-201ENST00000605066 256 ntBASIC12.96□□□□□ -0.33
CLDND2Q8NHS1 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.96□□□□□ -0.33
CLDND2Q8NHS1 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.96□□□□□ -0.33
CLDND2Q8NHS1 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CLDND2Q8NHS1 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDND2Q8NHS1 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
CLDND2Q8NHS1 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC12.96□□□□□ -0.33
CLDND2Q8NHS1 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CLDND2Q8NHS1 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDND2Q8NHS1 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CLDND2Q8NHS1 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CLDND2Q8NHS1 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
CLDND2Q8NHS1 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CLDND2Q8NHS1 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CLDND2Q8NHS1 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.96□□□□□ -0.34
CLDND2Q8NHS1 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.96□□□□□ -0.34
CLDND2Q8NHS1 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.34
CLDND2Q8NHS1 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
CLDND2Q8NHS1 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
CLDND2Q8NHS1 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.96□□□□□ -0.34
CLDND2Q8NHS1 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
CLDND2Q8NHS1 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
CLDND2Q8NHS1 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
CLDND2Q8NHS1 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 AC093525.8-201ENST00000624099 1342 ntBASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms