Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 AC023141.5-201ENST00000458585 616 ntBASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 TOMM22P5-201ENST00000416399 439 ntBASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 SAMD11P1-201ENST00000571429 661 ntBASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 AP001059.3-201ENST00000619053 235 ntBASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
BBS1Q8NFJ9 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms