Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 OR10B1P-201ENST00000601666 907 ntBASIC15.44■□□□□ 0.06
CHPFQ8IZ52 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 AC079178.1-201ENST00000420915 656 ntBASIC15.43■□□□□ 0.06
CHPFQ8IZ52 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 AC084346.2-201ENST00000607097 949 ntBASIC15.43■□□□□ 0.06
CHPFQ8IZ52 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 AC055811.4-201ENST00000624039 1754 ntBASIC15.43■□□□□ 0.06
CHPFQ8IZ52 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.42■□□□□ 0.06
CHPFQ8IZ52 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 PPY2P-201ENST00000582808 702 ntBASIC15.42■□□□□ 0.06
CHPFQ8IZ52 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 AC244157.2-201ENST00000616239 1006 ntBASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 145.6 ms