Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 OR10B1P-201ENST00000601666 907 ntBASIC15.44■□□□□ 0.06
CHPFQ8IZ52 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CHPFQ8IZ52 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 AC079178.1-201ENST00000420915 656 ntBASIC15.43■□□□□ 0.06
CHPFQ8IZ52 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 AC084346.2-201ENST00000607097 949 ntBASIC15.43■□□□□ 0.06
CHPFQ8IZ52 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 AC055811.4-201ENST00000624039 1754 ntBASIC15.43■□□□□ 0.06
CHPFQ8IZ52 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CHPFQ8IZ52 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.42■□□□□ 0.06
CHPFQ8IZ52 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 PPY2P-201ENST00000582808 702 ntBASIC15.42■□□□□ 0.06
CHPFQ8IZ52 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 AC244157.2-201ENST00000616239 1006 ntBASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms