Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NUDCD3Q8IVD9 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NUDCD3Q8IVD9 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.14■□□□□ 0.01
NUDCD3Q8IVD9 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
NUDCD3Q8IVD9 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NUDCD3Q8IVD9 AC055811.4-201ENST00000624039 1754 ntBASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 AC005237.2-201ENST00000434368 219 ntBASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 MTND6P24-201ENST00000440466 518 ntBASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 TPT1P11-201ENST00000458482 498 ntBASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 KRT126P-201ENST00000549467 1181 ntBASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NUDCD3Q8IVD9 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 AC079781.5-202ENST00000641784 3743 ntBASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 MCCD1P2-201ENST00000423228 335 ntBASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 TPM4P1-201ENST00000436100 807 ntBASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 SLC25A1P1-201ENST00000528351 927 ntBASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 MIR6069-201ENST00000620069 79 ntBASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NUDCD3Q8IVD9 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 AL035456.1-201ENST00000456064 1369 ntBASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms