Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 MKNK2P1-201ENST00000437526 628 ntBASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 KRT18P43-201ENST00000469825 1281 ntBASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 SAMD11P1-201ENST00000571429 661 ntBASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 BX640515.1-201ENST00000617215 977 ntBASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 MIR6069-201ENST00000620069 79 ntBASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 LINC00628-201ENST00000628516 1289 ntBASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 AC105339.1-204ENST00000636249 355 ntBASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRRTM1Q86UE6 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.21□□□□□ -0.29
LRRTM1Q86UE6 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.21□□□□□ -0.29
LRRTM1Q86UE6 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRRTM1Q86UE6 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.21□□□□□ -0.29
LRRTM1Q86UE6 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LRRTM1Q86UE6 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRRTM1Q86UE6 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LRRTM1Q86UE6 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRRTM1Q86UE6 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.21□□□□□ -0.29
LRRTM1Q86UE6 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRRTM1Q86UE6 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LRRTM1Q86UE6 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.21□□□□□ -0.29
LRRTM1Q86UE6 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.21□□□□□ -0.29
LRRTM1Q86UE6 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LRRTM1Q86UE6 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
LRRTM1Q86UE6 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LRRTM1Q86UE6 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LRRTM1Q86UE6 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRRTM1Q86UE6 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LRRTM1Q86UE6 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRRTM1Q86UE6 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRRTM1Q86UE6 KRT18P32-201ENST00000424695 1287 ntBASIC13.21□□□□□ -0.29
LRRTM1Q86UE6 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.21□□□□□ -0.29
LRRTM1Q86UE6 GPS2P2-201ENST00000430745 888 ntBASIC13.21□□□□□ -0.29
LRRTM1Q86UE6 HTR5BP-201ENST00000430851 1154 ntBASIC13.21□□□□□ -0.29
LRRTM1Q86UE6 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LRRTM1Q86UE6 AC022447.6-201ENST00000515522 438 ntBASIC13.21□□□□□ -0.29
LRRTM1Q86UE6 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRRTM1Q86UE6 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.21□□□□□ -0.29
LRRTM1Q86UE6 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.21□□□□□ -0.29
LRRTM1Q86UE6 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
LRRTM1Q86UE6 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LRRTM1Q86UE6 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.21□□□□□ -0.29
LRRTM1Q86UE6 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.21□□□□□ -0.29
LRRTM1Q86UE6 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
LRRTM1Q86UE6 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRRTM1Q86UE6 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LRRTM1Q86UE6 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.21□□□□□ -0.3
LRRTM1Q86UE6 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LRRTM1Q86UE6 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LRRTM1Q86UE6 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LRRTM1Q86UE6 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.21□□□□□ -0.3
LRRTM1Q86UE6 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
LRRTM1Q86UE6 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LRRTM1Q86UE6 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LRRTM1Q86UE6 AC023090.2-201ENST00000625182 2110 ntBASIC13.21□□□□□ -0.3
LRRTM1Q86UE6 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LRRTM1Q86UE6 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LRRTM1Q86UE6 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LRRTM1Q86UE6 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.21□□□□□ -0.3
LRRTM1Q86UE6 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LRRTM1Q86UE6 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 AC018665.1-201ENST00000622927 1362 ntBASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms