Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 FOXO1B-201ENST00000504678 1527 ntBASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 AL356488.2-201ENST00000602755 427 ntBASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 SPTSSB-204ENST00000617024 1292 ntBASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 MIR1199-201ENST00000621445 119 ntBASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC16.12■□□□□ 0.17
ERCC6LQ2NKX8 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 RPS2P1-201ENST00000434010 821 ntBASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 MIR497HG-202ENST00000572453 3838 ntBASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 CROT-203ENST00000419147 2959 ntTSL 2 BASIC16.11■□□□□ 0.17
ERCC6LQ2NKX8 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 AC111170.3-201ENST00000624282 2464 ntBASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms