Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CD47Q08722 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD47Q08722 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.17□□□□□ -0.14
CD47Q08722 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD47Q08722 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
CD47Q08722 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CD47Q08722 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
CD47Q08722 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CD47Q08722 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD47Q08722 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD47Q08722 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CD47Q08722 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD47Q08722 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD47Q08722 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD47Q08722 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.16□□□□□ -0.14
CD47Q08722 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CD47Q08722 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.16□□□□□ -0.14
CD47Q08722 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD47Q08722 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
CD47Q08722 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CD47Q08722 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD47Q08722 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CD47Q08722 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.16□□□□□ -0.14
CD47Q08722 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD47Q08722 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD47Q08722 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.16□□□□□ -0.14
CD47Q08722 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.16□□□□□ -0.14
CD47Q08722 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD47Q08722 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD47Q08722 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD47Q08722 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CD47Q08722 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD47Q08722 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CD47Q08722 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.16□□□□□ -0.14
CD47Q08722 MTND6P24-201ENST00000440466 518 ntBASIC14.16□□□□□ -0.14
CD47Q08722 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.16□□□□□ -0.14
CD47Q08722 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CD47Q08722 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.16□□□□□ -0.14
CD47Q08722 SNHG9-202ENST00000564014 471 ntBASIC14.16□□□□□ -0.14
CD47Q08722 AC105021.1-202ENST00000570572 669 ntBASIC14.16□□□□□ -0.14
CD47Q08722 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD47Q08722 AC009093.7-201ENST00000623853 1223 ntBASIC14.16□□□□□ -0.14
CD47Q08722 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CD47Q08722 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CD47Q08722 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CD47Q08722 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.16□□□□□ -0.14
CD47Q08722 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.16□□□□□ -0.14
CD47Q08722 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD47Q08722 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD47Q08722 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD47Q08722 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CD47Q08722 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD47Q08722 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD47Q08722 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
CD47Q08722 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.16□□□□□ -0.14
CD47Q08722 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD47Q08722 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD47Q08722 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD47Q08722 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD47Q08722 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD47Q08722 COL6A4P2-202ENST00000504443 2753 ntBASIC14.16□□□□□ -0.14
CD47Q08722 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CD47Q08722 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.16□□□□□ -0.14
CD47Q08722 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
CD47Q08722 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CD47Q08722 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.16□□□□□ -0.14
CD47Q08722 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD47Q08722 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CD47Q08722 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD47Q08722 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD47Q08722 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD47Q08722 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD47Q08722 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CD47Q08722 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
CD47Q08722 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD47Q08722 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD47Q08722 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD47Q08722 AC138969.3-201ENST00000546612 1459 ntBASIC14.15□□□□□ -0.14
CD47Q08722 AC138932.2-201ENST00000548268 1459 ntBASIC14.15□□□□□ -0.14
CD47Q08722 AC126755.4-201ENST00000549796 1459 ntBASIC14.15□□□□□ -0.14
CD47Q08722 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CD47Q08722 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.15□□□□□ -0.14
CD47Q08722 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD47Q08722 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD47Q08722 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD47Q08722 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD47Q08722 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.15□□□□□ -0.14
CD47Q08722 CNN2P11-201ENST00000429351 262 ntBASIC14.15□□□□□ -0.14
CD47Q08722 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD47Q08722 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.15□□□□□ -0.14
CD47Q08722 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.15□□□□□ -0.14
CD47Q08722 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.15□□□□□ -0.14
CD47Q08722 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD47Q08722 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.15□□□□□ -0.14
CD47Q08722 AC026150.2-201ENST00000564693 1156 ntBASIC14.15□□□□□ -0.14
CD47Q08722 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD47Q08722 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD47Q08722 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CD47Q08722 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CD47Q08722 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms