Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDK5Q00535 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDK5Q00535 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDK5Q00535 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDK5Q00535 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDK5Q00535 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDK5Q00535 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CDK5Q00535 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.7□□□□□ -0.22
CDK5Q00535 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDK5Q00535 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDK5Q00535 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDK5Q00535 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CDK5Q00535 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CDK5Q00535 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDK5Q00535 AL137783.1-201ENST00000623494 1896 ntBASIC13.7□□□□□ -0.22
CDK5Q00535 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDK5Q00535 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDK5Q00535 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.69□□□□□ -0.22
CDK5Q00535 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.69□□□□□ -0.22
CDK5Q00535 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDK5Q00535 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDK5Q00535 TUBB3P1-201ENST00000405796 1332 ntBASIC13.69□□□□□ -0.22
CDK5Q00535 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDK5Q00535 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDK5Q00535 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDK5Q00535 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDK5Q00535 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.69□□□□□ -0.22
CDK5Q00535 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDK5Q00535 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDK5Q00535 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDK5Q00535 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDK5Q00535 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDK5Q00535 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDK5Q00535 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.69□□□□□ -0.22
CDK5Q00535 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.69□□□□□ -0.22
CDK5Q00535 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.69□□□□□ -0.22
CDK5Q00535 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CDK5Q00535 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.69□□□□□ -0.22
CDK5Q00535 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.69□□□□□ -0.22
CDK5Q00535 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.69□□□□□ -0.22
CDK5Q00535 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.69□□□□□ -0.22
CDK5Q00535 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.69□□□□□ -0.22
CDK5Q00535 RN7SL618P-201ENST00000477850 296 ntBASIC13.69□□□□□ -0.22
CDK5Q00535 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDK5Q00535 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDK5Q00535 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.69□□□□□ -0.22
CDK5Q00535 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDK5Q00535 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.69□□□□□ -0.22
CDK5Q00535 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.69□□□□□ -0.22
CDK5Q00535 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.69□□□□□ -0.22
CDK5Q00535 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.69□□□□□ -0.22
CDK5Q00535 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.69□□□□□ -0.22
CDK5Q00535 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDK5Q00535 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.69□□□□□ -0.22
CDK5Q00535 AL121894.2-201ENST00000602977 491 ntBASIC13.69□□□□□ -0.22
CDK5Q00535 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDK5Q00535 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDK5Q00535 AC004461.2-201ENST00000629517 803 ntBASIC13.69□□□□□ -0.22
CDK5Q00535 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDK5Q00535 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CDK5Q00535 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDK5Q00535 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDK5Q00535 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.69□□□□□ -0.22
CDK5Q00535 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDK5Q00535 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.69□□□□□ -0.22
CDK5Q00535 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDK5Q00535 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CDK5Q00535 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CDK5Q00535 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDK5Q00535 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDK5Q00535 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDK5Q00535 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDK5Q00535 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDK5Q00535 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDK5Q00535 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CDK5Q00535 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDK5Q00535 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.69□□□□□ -0.22
CDK5Q00535 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDK5Q00535 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.69□□□□□ -0.22
CDK5Q00535 AC016397.2-201ENST00000624848 1985 ntBASIC13.69□□□□□ -0.22
CDK5Q00535 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDK5Q00535 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDK5Q00535 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDK5Q00535 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDK5Q00535 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CDK5Q00535 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDK5Q00535 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.68□□□□□ -0.22
CDK5Q00535 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.68□□□□□ -0.22
CDK5Q00535 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDK5Q00535 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDK5Q00535 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.68□□□□□ -0.22
CDK5Q00535 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.68□□□□□ -0.22
CDK5Q00535 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.68□□□□□ -0.22
CDK5Q00535 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDK5Q00535 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDK5Q00535 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.68□□□□□ -0.22
CDK5Q00535 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDK5Q00535 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.68□□□□□ -0.22
CDK5Q00535 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.68□□□□□ -0.22
CDK5Q00535 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms