Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
IRX3P78415 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
IRX3P78415 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
IRX3P78415 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.71■□□□□ 0.42
IRX3P78415 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
IRX3P78415 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
IRX3P78415 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
IRX3P78415 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
IRX3P78415 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IRX3P78415 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.7■□□□□ 0.42
IRX3P78415 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
IRX3P78415 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
IRX3P78415 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IRX3P78415 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IRX3P78415 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
IRX3P78415 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IRX3P78415 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
IRX3P78415 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
IRX3P78415 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IRX3P78415 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
IRX3P78415 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IRX3P78415 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IRX3P78415 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
IRX3P78415 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IRX3P78415 AP003680.1-201ENST00000598970 3660 ntBASIC17.7■□□□□ 0.42
IRX3P78415 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IRX3P78415 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.7■□□□□ 0.42
IRX3P78415 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
IRX3P78415 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.7■□□□□ 0.42
IRX3P78415 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.7■□□□□ 0.42
IRX3P78415 LINC02447-202ENST00000501888 2146 ntBASIC17.7■□□□□ 0.42
IRX3P78415 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
IRX3P78415 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.7■□□□□ 0.42
IRX3P78415 COG4-212ENST00000564653 590 ntTSL 5 BASIC17.7■□□□□ 0.42
IRX3P78415 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.7■□□□□ 0.42
IRX3P78415 RN7SL190P-201ENST00000582519 257 ntBASIC17.7■□□□□ 0.42
IRX3P78415 OR10B1P-201ENST00000601666 907 ntBASIC17.7■□□□□ 0.42
IRX3P78415 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.7■□□□□ 0.42
IRX3P78415 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
IRX3P78415 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.7■□□□□ 0.42
IRX3P78415 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.7■□□□□ 0.42
IRX3P78415 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
IRX3P78415 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
IRX3P78415 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IRX3P78415 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC17.7■□□□□ 0.42
IRX3P78415 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
IRX3P78415 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IRX3P78415 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC17.7■□□□□ 0.42
IRX3P78415 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IRX3P78415 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.7■□□□□ 0.42
IRX3P78415 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
IRX3P78415 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IRX3P78415 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.69■□□□□ 0.42
IRX3P78415 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IRX3P78415 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
IRX3P78415 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IRX3P78415 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
IRX3P78415 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.69■□□□□ 0.42
IRX3P78415 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
IRX3P78415 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
IRX3P78415 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
IRX3P78415 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
IRX3P78415 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC17.69■□□□□ 0.42
IRX3P78415 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IRX3P78415 EIF4HP1-201ENST00000453115 687 ntBASIC17.69■□□□□ 0.42
IRX3P78415 RN7SL713P-201ENST00000582127 302 ntBASIC17.69■□□□□ 0.42
IRX3P78415 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IRX3P78415 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.69■□□□□ 0.42
IRX3P78415 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IRX3P78415 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IRX3P78415 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IRX3P78415 AC084364.1-201ENST00000551967 1556 ntBASIC17.69■□□□□ 0.42
IRX3P78415 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
IRX3P78415 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
IRX3P78415 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.69■□□□□ 0.42
IRX3P78415 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IRX3P78415 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IRX3P78415 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IRX3P78415 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.68■□□□□ 0.42
IRX3P78415 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IRX3P78415 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IRX3P78415 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.68■□□□□ 0.42
IRX3P78415 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IRX3P78415 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
IRX3P78415 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IRX3P78415 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IRX3P78415 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IRX3P78415 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.68■□□□□ 0.42
IRX3P78415 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
IRX3P78415 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
IRX3P78415 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.68■□□□□ 0.42
IRX3P78415 EIF3FP3-201ENST00000434851 1086 ntBASIC17.68■□□□□ 0.42
IRX3P78415 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC17.68■□□□□ 0.42
IRX3P78415 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.68■□□□□ 0.42
IRX3P78415 UPF3AP2-201ENST00000457924 1132 ntBASIC17.68■□□□□ 0.42
IRX3P78415 AC022616.1-201ENST00000518688 554 ntBASIC17.68■□□□□ 0.42
IRX3P78415 AC079328.1-201ENST00000560358 952 ntBASIC17.68■□□□□ 0.42
IRX3P78415 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.68■□□□□ 0.42
IRX3P78415 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
IRX3P78415 AC079781.5-202ENST00000641784 3743 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms