Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
IRX4P78413 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
IRX4P78413 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
IRX4P78413 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IRX4P78413 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
IRX4P78413 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IRX4P78413 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.89■□□□□ 0.13
IRX4P78413 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IRX4P78413 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
IRX4P78413 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
IRX4P78413 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
IRX4P78413 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.89■□□□□ 0.13
IRX4P78413 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
IRX4P78413 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
IRX4P78413 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
IRX4P78413 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.89■□□□□ 0.13
IRX4P78413 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
IRX4P78413 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
IRX4P78413 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IRX4P78413 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IRX4P78413 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.89■□□□□ 0.13
IRX4P78413 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IRX4P78413 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
IRX4P78413 AC092933.1-201ENST00000393644 945 ntBASIC15.89■□□□□ 0.13
IRX4P78413 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IRX4P78413 BRWD1P1-201ENST00000401091 371 ntBASIC15.89■□□□□ 0.13
IRX4P78413 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
IRX4P78413 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.89■□□□□ 0.13
IRX4P78413 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.89■□□□□ 0.13
IRX4P78413 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.89■□□□□ 0.13
IRX4P78413 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.89■□□□□ 0.13
IRX4P78413 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.89■□□□□ 0.13
IRX4P78413 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.89■□□□□ 0.13
IRX4P78413 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.89■□□□□ 0.13
IRX4P78413 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.89■□□□□ 0.13
IRX4P78413 AC025048.3-201ENST00000590609 569 ntBASIC15.89■□□□□ 0.13
IRX4P78413 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
IRX4P78413 AC005702.4-201ENST00000618393 416 ntBASIC15.89■□□□□ 0.13
IRX4P78413 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
IRX4P78413 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
IRX4P78413 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
IRX4P78413 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IRX4P78413 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IRX4P78413 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IRX4P78413 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
IRX4P78413 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.89■□□□□ 0.13
IRX4P78413 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
IRX4P78413 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.89■□□□□ 0.13
IRX4P78413 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
IRX4P78413 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
IRX4P78413 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
IRX4P78413 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.89■□□□□ 0.13
IRX4P78413 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.89■□□□□ 0.13
IRX4P78413 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
IRX4P78413 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
IRX4P78413 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
IRX4P78413 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
IRX4P78413 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
IRX4P78413 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
IRX4P78413 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
IRX4P78413 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.88■□□□□ 0.13
IRX4P78413 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
IRX4P78413 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
IRX4P78413 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
IRX4P78413 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IRX4P78413 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IRX4P78413 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IRX4P78413 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.88■□□□□ 0.13
IRX4P78413 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.88■□□□□ 0.13
IRX4P78413 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
IRX4P78413 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
IRX4P78413 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
IRX4P78413 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.88■□□□□ 0.13
IRX4P78413 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.88■□□□□ 0.13
IRX4P78413 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.88■□□□□ 0.13
IRX4P78413 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.88■□□□□ 0.13
IRX4P78413 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
IRX4P78413 AC007292.2-201ENST00000593524 1812 ntBASIC15.88■□□□□ 0.13
IRX4P78413 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.88■□□□□ 0.13
IRX4P78413 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
IRX4P78413 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.88■□□□□ 0.13
IRX4P78413 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.88■□□□□ 0.13
IRX4P78413 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
IRX4P78413 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
IRX4P78413 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
IRX4P78413 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.88■□□□□ 0.13
IRX4P78413 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
IRX4P78413 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IRX4P78413 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
IRX4P78413 AC126335.2-201ENST00000623362 4637 ntBASIC15.88■□□□□ 0.13
IRX4P78413 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IRX4P78413 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
IRX4P78413 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
IRX4P78413 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IRX4P78413 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IRX4P78413 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.87■□□□□ 0.13
IRX4P78413 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
IRX4P78413 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
IRX4P78413 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
IRX4P78413 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms