Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABREP78334 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GABREP78334 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.38□□□□□ -0.11
GABREP78334 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABREP78334 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABREP78334 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.37□□□□□ -0.11
GABREP78334 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
GABREP78334 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABREP78334 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABREP78334 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABREP78334 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.37□□□□□ -0.11
GABREP78334 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GABREP78334 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.37□□□□□ -0.11
GABREP78334 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
GABREP78334 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABREP78334 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABREP78334 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABREP78334 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.37□□□□□ -0.11
GABREP78334 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
GABREP78334 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABREP78334 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GABREP78334 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GABREP78334 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABREP78334 AL157791.1-201ENST00000553667 1699 ntBASIC14.37□□□□□ -0.11
GABREP78334 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABREP78334 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GABREP78334 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABREP78334 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABREP78334 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABREP78334 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC14.37□□□□□ -0.11
GABREP78334 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.37□□□□□ -0.11
GABREP78334 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABREP78334 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC14.37□□□□□ -0.11
GABREP78334 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABREP78334 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GABREP78334 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.37□□□□□ -0.11
GABREP78334 AC006335.1-201ENST00000445200 547 ntBASIC14.37□□□□□ -0.11
GABREP78334 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC14.37□□□□□ -0.11
GABREP78334 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.37□□□□□ -0.11
GABREP78334 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.37□□□□□ -0.11
GABREP78334 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.37□□□□□ -0.11
GABREP78334 IQSEC3P1-201ENST00000538799 536 ntBASIC14.37□□□□□ -0.11
GABREP78334 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.37□□□□□ -0.11
GABREP78334 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC14.37□□□□□ -0.11
GABREP78334 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.37□□□□□ -0.11
GABREP78334 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.37□□□□□ -0.11
GABREP78334 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GABREP78334 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.37□□□□□ -0.11
GABREP78334 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC14.37□□□□□ -0.11
GABREP78334 PAUPAR-201ENST00000630360 2965 ntBASIC14.37□□□□□ -0.11
GABREP78334 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GABREP78334 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
GABREP78334 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.37□□□□□ -0.11
GABREP78334 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABREP78334 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABREP78334 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GABREP78334 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.37□□□□□ -0.11
GABREP78334 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GABREP78334 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABREP78334 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
GABREP78334 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABREP78334 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABREP78334 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABREP78334 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABREP78334 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GABREP78334 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABREP78334 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABREP78334 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
GABREP78334 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABREP78334 LINC02447-202ENST00000501888 2146 ntBASIC14.36□□□□□ -0.11
GABREP78334 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
GABREP78334 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GABREP78334 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.36□□□□□ -0.11
GABREP78334 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.36□□□□□ -0.11
GABREP78334 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GABREP78334 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABREP78334 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GABREP78334 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GABREP78334 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
GABREP78334 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
GABREP78334 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
GABREP78334 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
GABREP78334 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABREP78334 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABREP78334 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GABREP78334 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GABREP78334 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.36□□□□□ -0.11
GABREP78334 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABREP78334 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABREP78334 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABREP78334 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABREP78334 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABREP78334 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.36□□□□□ -0.11
GABREP78334 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GABREP78334 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.36□□□□□ -0.11
GABREP78334 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC14.36□□□□□ -0.11
GABREP78334 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GABREP78334 MARK2P5-201ENST00000507649 634 ntBASIC14.36□□□□□ -0.11
GABREP78334 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC14.36□□□□□ -0.11
GABREP78334 AC100827.2-201ENST00000563214 1194 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms