Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H3AP68431 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H3AP68431 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.27□□□□□ -0.29
HIST1H3AP68431 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.27□□□□□ -0.29
HIST1H3AP68431 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
HIST1H3AP68431 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H3AP68431 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
HIST1H3AP68431 AC002472.2-201ENST00000442739 958 ntBASIC13.27□□□□□ -0.29
HIST1H3AP68431 ELK1P1-201ENST00000485699 580 ntBASIC13.27□□□□□ -0.29
HIST1H3AP68431 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.27□□□□□ -0.29
HIST1H3AP68431 AC133539.2-201ENST00000604757 467 ntBASIC13.27□□□□□ -0.29
HIST1H3AP68431 LINC00552-201ENST00000625151 2579 ntBASIC13.27□□□□□ -0.29
HIST1H3AP68431 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H3AP68431 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.27□□□□□ -0.29
HIST1H3AP68431 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H3AP68431 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H3AP68431 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H3AP68431 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H3AP68431 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.27□□□□□ -0.29
HIST1H3AP68431 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H3AP68431 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H3AP68431 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H3AP68431 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.27□□□□□ -0.29
HIST1H3AP68431 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H3AP68431 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H3AP68431 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H3AP68431 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H3AP68431 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H3AP68431 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H3AP68431 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H3AP68431 AP002414.2-201ENST00000591780 3365 ntBASIC13.26□□□□□ -0.29
HIST1H3AP68431 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H3AP68431 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H3AP68431 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
HIST1H3AP68431 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H3AP68431 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H3AP68431 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
HIST1H3AP68431 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
HIST1H3AP68431 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.26□□□□□ -0.29
HIST1H3AP68431 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H3AP68431 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H3AP68431 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
HIST1H3AP68431 RNU1-114P-201ENST00000365297 166 ntBASIC13.26□□□□□ -0.29
HIST1H3AP68431 ACKR1-201ENST00000368121 1240 ntBASIC13.26□□□□□ -0.29
HIST1H3AP68431 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H3AP68431 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H3AP68431 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.26□□□□□ -0.29
HIST1H3AP68431 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H3AP68431 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H3AP68431 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
HIST1H3AP68431 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.26□□□□□ -0.29
HIST1H3AP68431 AC022616.1-201ENST00000518688 554 ntBASIC13.26□□□□□ -0.29
HIST1H3AP68431 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.26□□□□□ -0.29
HIST1H3AP68431 AP001582.1-201ENST00000525856 295 ntBASIC13.26□□□□□ -0.29
HIST1H3AP68431 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.26□□□□□ -0.29
HIST1H3AP68431 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H3AP68431 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.26□□□□□ -0.29
HIST1H3AP68431 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H3AP68431 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
HIST1H3AP68431 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.26□□□□□ -0.29
HIST1H3AP68431 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H3AP68431 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.26□□□□□ -0.29
HIST1H3AP68431 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H3AP68431 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.26□□□□□ -0.29
HIST1H3AP68431 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H3AP68431 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.26□□□□□ -0.29
HIST1H3AP68431 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H3AP68431 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.26□□□□□ -0.29
HIST1H3AP68431 AC018529.2-202ENST00000611482 3087 ntBASIC13.26□□□□□ -0.29
HIST1H3AP68431 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.26□□□□□ -0.29
HIST1H3AP68431 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.26□□□□□ -0.29
HIST1H3AP68431 AC005252.2-201ENST00000624630 1141 ntBASIC13.26□□□□□ -0.29
HIST1H3AP68431 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.26□□□□□ -0.29
HIST1H3AP68431 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H3AP68431 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
HIST1H3AP68431 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
HIST1H3AP68431 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H3AP68431 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H3AP68431 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H3AP68431 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H3AP68431 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H3AP68431 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H3AP68431 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H3AP68431 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
HIST1H3AP68431 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H3AP68431 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H3AP68431 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H3AP68431 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H3AP68431 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H3AP68431 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H3AP68431 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
HIST1H3AP68431 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
HIST1H3AP68431 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.25□□□□□ -0.29
HIST1H3AP68431 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H3AP68431 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
HIST1H3AP68431 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.25□□□□□ -0.29
HIST1H3AP68431 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H3AP68431 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.25□□□□□ -0.29
HIST1H3AP68431 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H3AP68431 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms