Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CKS1BP61024 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC10.75□□□□□ -0.69
CKS1BP61024 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
CKS1BP61024 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
CKS1BP61024 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CKS1BP61024 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
CKS1BP61024 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
CKS1BP61024 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC10.75□□□□□ -0.69
CKS1BP61024 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
CKS1BP61024 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
CKS1BP61024 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CKS1BP61024 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
CKS1BP61024 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC10.75□□□□□ -0.69
CKS1BP61024 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
CKS1BP61024 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC10.75□□□□□ -0.69
CKS1BP61024 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC10.75□□□□□ -0.69
CKS1BP61024 AC093724.1-201ENST00000448659 1027 ntBASIC10.75□□□□□ -0.69
CKS1BP61024 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
CKS1BP61024 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC10.75□□□□□ -0.69
CKS1BP61024 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC10.75□□□□□ -0.69
CKS1BP61024 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CKS1BP61024 KRT18P35-201ENST00000510488 1269 ntBASIC10.75□□□□□ -0.69
CKS1BP61024 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
CKS1BP61024 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
CKS1BP61024 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
CKS1BP61024 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
CKS1BP61024 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC10.75□□□□□ -0.69
CKS1BP61024 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CKS1BP61024 AC004790.2-201ENST00000623588 572 ntBASIC10.75□□□□□ -0.69
CKS1BP61024 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CKS1BP61024 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CKS1BP61024 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
CKS1BP61024 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
CKS1BP61024 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
CKS1BP61024 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CKS1BP61024 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CKS1BP61024 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CKS1BP61024 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CKS1BP61024 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC10.75□□□□□ -0.69
CKS1BP61024 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CKS1BP61024 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CKS1BP61024 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
CKS1BP61024 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
CKS1BP61024 AL359881.3-201ENST00000602640 1721 ntBASIC10.75□□□□□ -0.69
CKS1BP61024 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC10.75□□□□□ -0.69
CKS1BP61024 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CKS1BP61024 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
CKS1BP61024 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC10.75□□□□□ -0.69
CKS1BP61024 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
CKS1BP61024 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC10.74□□□□□ -0.69
CKS1BP61024 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC10.74□□□□□ -0.69
CKS1BP61024 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
CKS1BP61024 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC10.74□□□□□ -0.69
CKS1BP61024 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
CKS1BP61024 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC10.74□□□□□ -0.69
CKS1BP61024 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC10.74□□□□□ -0.69
CKS1BP61024 AMT-204ENST00000427987 1646 ntTSL 5 BASIC10.74□□□□□ -0.69
CKS1BP61024 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
CKS1BP61024 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
CKS1BP61024 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC10.74□□□□□ -0.69
CKS1BP61024 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC10.74□□□□□ -0.69
CKS1BP61024 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
CKS1BP61024 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 HMGA1P7-201ENST00000406908 502 ntBASIC10.74□□□□□ -0.69
CKS1BP61024 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC10.74□□□□□ -0.69
CKS1BP61024 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC10.74□□□□□ -0.69
CKS1BP61024 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC10.74□□□□□ -0.69
CKS1BP61024 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC10.74□□□□□ -0.69
CKS1BP61024 AC108073.2-201ENST00000464002 357 ntBASIC10.74□□□□□ -0.69
CKS1BP61024 AF186996.4-201ENST00000467186 377 ntBASIC10.74□□□□□ -0.69
CKS1BP61024 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC10.74□□□□□ -0.69
CKS1BP61024 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC10.74□□□□□ -0.69
CKS1BP61024 RNPS1P1-201ENST00000507437 918 ntBASIC10.74□□□□□ -0.69
CKS1BP61024 CFL1-202ENST00000524553 860 ntTSL 2 BASIC10.74□□□□□ -0.69
CKS1BP61024 TPM1-226ENST00000560959 925 ntTSL 2 BASIC10.74□□□□□ -0.69
CKS1BP61024 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC10.74□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms