Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.09□□□□□ -0.31
AP3S2P59780 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S2P59780 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.09□□□□□ -0.31
AP3S2P59780 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
AP3S2P59780 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.08□□□□□ -0.31
AP3S2P59780 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC13.08□□□□□ -0.31
AP3S2P59780 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
AP3S2P59780 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
AP3S2P59780 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
AP3S2P59780 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.08□□□□□ -0.31
AP3S2P59780 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
AP3S2P59780 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
AP3S2P59780 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
AP3S2P59780 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.08□□□□□ -0.31
AP3S2P59780 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.08□□□□□ -0.31
AP3S2P59780 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
AP3S2P59780 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.31
AP3S2P59780 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.08□□□□□ -0.32
AP3S2P59780 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S2P59780 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S2P59780 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S2P59780 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.08□□□□□ -0.32
AP3S2P59780 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.08□□□□□ -0.32
AP3S2P59780 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.08□□□□□ -0.32
AP3S2P59780 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.08□□□□□ -0.32
AP3S2P59780 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S2P59780 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S2P59780 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S2P59780 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S2P59780 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S2P59780 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.08□□□□□ -0.32
AP3S2P59780 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S2P59780 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S2P59780 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.08□□□□□ -0.32
AP3S2P59780 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
AP3S2P59780 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S2P59780 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.08□□□□□ -0.32
AP3S2P59780 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S2P59780 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S2P59780 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.08□□□□□ -0.32
AP3S2P59780 AC140658.5-201ENST00000438532 169 ntBASIC13.08□□□□□ -0.32
AP3S2P59780 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.08□□□□□ -0.32
AP3S2P59780 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.08□□□□□ -0.32
AP3S2P59780 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.08□□□□□ -0.32
AP3S2P59780 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.08□□□□□ -0.32
AP3S2P59780 AC105233.2-201ENST00000523697 349 ntBASIC13.08□□□□□ -0.32
AP3S2P59780 AF228730.5-201ENST00000530288 346 ntBASIC13.08□□□□□ -0.32
AP3S2P59780 AC105339.3-201ENST00000560043 636 ntBASIC13.08□□□□□ -0.32
AP3S2P59780 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.08□□□□□ -0.32
AP3S2P59780 AC092119.3-201ENST00000612618 583 ntBASIC13.08□□□□□ -0.32
AP3S2P59780 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.08□□□□□ -0.32
AP3S2P59780 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
AP3S2P59780 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.08□□□□□ -0.32
AP3S2P59780 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S2P59780 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S2P59780 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.08□□□□□ -0.32
AP3S2P59780 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S2P59780 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.08□□□□□ -0.32
AP3S2P59780 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S2P59780 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S2P59780 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S2P59780 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.08□□□□□ -0.32
AP3S2P59780 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S2P59780 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S2P59780 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S2P59780 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
AP3S2P59780 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC13.08□□□□□ -0.32
AP3S2P59780 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
AP3S2P59780 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S2P59780 TCAM1P-207ENST00000485295 1537 ntBASIC13.08□□□□□ -0.32
AP3S2P59780 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S2P59780 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
AP3S2P59780 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S2P59780 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
AP3S2P59780 AC015909.5-201ENST00000624336 2266 ntBASIC13.08□□□□□ -0.32
AP3S2P59780 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.07□□□□□ -0.32
AP3S2P59780 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S2P59780 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S2P59780 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S2P59780 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.07□□□□□ -0.32
AP3S2P59780 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S2P59780 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
AP3S2P59780 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.07□□□□□ -0.32
AP3S2P59780 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S2P59780 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.07□□□□□ -0.32
AP3S2P59780 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S2P59780 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S2P59780 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S2P59780 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S2P59780 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S2P59780 AC005562.1-201ENST00000583030 3219 ntBASIC13.07□□□□□ -0.32
AP3S2P59780 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S2P59780 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S2P59780 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S2P59780 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
AP3S2P59780 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S2P59780 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
AP3S2P59780 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S2P59780 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.07□□□□□ -0.32
AP3S2P59780 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms