Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CLDN2P57739 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.93□□□□□ -0.02
CLDN2P57739 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN2P57739 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN2P57739 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN2P57739 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN2P57739 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.93□□□□□ -0.02
CLDN2P57739 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CLDN2P57739 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CLDN2P57739 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.93□□□□□ -0.02
CLDN2P57739 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN2P57739 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.93□□□□□ -0.02
CLDN2P57739 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CLDN2P57739 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CLDN2P57739 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.93□□□□□ -0.02
CLDN2P57739 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN2P57739 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CLDN2P57739 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN2P57739 AC112693.3-201ENST00000624819 1983 ntBASIC14.93□□□□□ -0.02
CLDN2P57739 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN2P57739 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN2P57739 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
CLDN2P57739 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.92□□□□□ -0.02
CLDN2P57739 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CLDN2P57739 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CLDN2P57739 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CLDN2P57739 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN2P57739 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN2P57739 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.92□□□□□ -0.02
CLDN2P57739 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CLDN2P57739 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.92□□□□□ -0.02
CLDN2P57739 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN2P57739 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CLDN2P57739 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.92□□□□□ -0.02
CLDN2P57739 FNTAP2-201ENST00000430308 634 ntBASIC14.92□□□□□ -0.02
CLDN2P57739 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.92□□□□□ -0.02
CLDN2P57739 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN2P57739 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.92□□□□□ -0.02
CLDN2P57739 AC005730.2-201ENST00000564549 1184 ntBASIC14.92□□□□□ -0.02
CLDN2P57739 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.92□□□□□ -0.02
CLDN2P57739 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.92□□□□□ -0.02
CLDN2P57739 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
CLDN2P57739 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.92□□□□□ -0.02
CLDN2P57739 AC244452.3-201ENST00000636814 210 ntBASIC14.92□□□□□ -0.02
CLDN2P57739 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN2P57739 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.92□□□□□ -0.02
CLDN2P57739 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN2P57739 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.92□□□□□ -0.02
CLDN2P57739 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.92□□□□□ -0.02
CLDN2P57739 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN2P57739 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN2P57739 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.92□□□□□ -0.02
CLDN2P57739 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.92□□□□□ -0.02
CLDN2P57739 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CLDN2P57739 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN2P57739 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CLDN2P57739 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CLDN2P57739 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN2P57739 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.91□□□□□ -0.02
CLDN2P57739 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN2P57739 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CLDN2P57739 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN2P57739 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN2P57739 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CLDN2P57739 AC023024.2-201ENST00000623561 1993 ntBASIC14.91□□□□□ -0.02
CLDN2P57739 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN2P57739 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN2P57739 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN2P57739 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CLDN2P57739 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN2P57739 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
CLDN2P57739 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CLDN2P57739 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CLDN2P57739 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN2P57739 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN2P57739 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.91□□□□□ -0.02
CLDN2P57739 AC004945.1-201ENST00000416738 983 ntBASIC14.91□□□□□ -0.02
CLDN2P57739 POM121L10P-201ENST00000436994 1285 ntBASIC14.91□□□□□ -0.02
CLDN2P57739 AKR7A2P1-201ENST00000460134 915 ntBASIC14.91□□□□□ -0.02
CLDN2P57739 ACTG1P17-201ENST00000558391 1119 ntBASIC14.91□□□□□ -0.02
CLDN2P57739 AP000845.1-201ENST00000581677 2131 ntBASIC14.91□□□□□ -0.02
CLDN2P57739 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN2P57739 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.91□□□□□ -0.02
CLDN2P57739 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.91□□□□□ -0.02
CLDN2P57739 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.91□□□□□ -0.02
CLDN2P57739 AC007663.3-201ENST00000609632 465 ntBASIC14.91□□□□□ -0.02
CLDN2P57739 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN2P57739 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN2P57739 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.91□□□□□ -0.02
CLDN2P57739 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN2P57739 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN2P57739 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN2P57739 SSR4P1-203ENST00000599569 2260 ntBASIC14.91□□□□□ -0.02
CLDN2P57739 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CLDN2P57739 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
CLDN2P57739 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.91□□□□□ -0.02
CLDN2P57739 AC020910.5-201ENST00000623668 1865 ntBASIC14.91□□□□□ -0.02
CLDN2P57739 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.91□□□□□ -0.02
CLDN2P57739 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN2P57739 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms