Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CLDN6P56747 AC020922.3-201ENST00000595064 547 ntBASIC14.52□□□□□ -0.09
CLDN6P56747 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.52□□□□□ -0.09
CLDN6P56747 AC012044.1-201ENST00000603431 297 ntBASIC14.52□□□□□ -0.09
CLDN6P56747 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN6P56747 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.52□□□□□ -0.09
CLDN6P56747 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
CLDN6P56747 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN6P56747 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN6P56747 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CLDN6P56747 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.52□□□□□ -0.09
CLDN6P56747 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN6P56747 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN6P56747 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.52□□□□□ -0.09
CLDN6P56747 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN6P56747 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.09
CLDN6P56747 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.52□□□□□ -0.09
CLDN6P56747 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CLDN6P56747 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN6P56747 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN6P56747 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN6P56747 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN6P56747 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.51□□□□□ -0.09
CLDN6P56747 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
CLDN6P56747 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
CLDN6P56747 AL157414.3-201ENST00000624276 1954 ntBASIC14.51□□□□□ -0.09
CLDN6P56747 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN6P56747 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN6P56747 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN6P56747 INE2-201ENST00000630399 1874 ntBASIC14.51□□□□□ -0.09
CLDN6P56747 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN6P56747 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
CLDN6P56747 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN6P56747 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN6P56747 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN6P56747 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN6P56747 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN6P56747 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN6P56747 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CLDN6P56747 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.51□□□□□ -0.09
CLDN6P56747 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC14.51□□□□□ -0.09
CLDN6P56747 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN6P56747 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.51□□□□□ -0.09
CLDN6P56747 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.51□□□□□ -0.09
CLDN6P56747 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CLDN6P56747 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN6P56747 CEP164P1-201ENST00000455142 418 ntBASIC14.51□□□□□ -0.09
CLDN6P56747 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.51□□□□□ -0.09
CLDN6P56747 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.51□□□□□ -0.09
CLDN6P56747 RTN3P1-201ENST00000536295 711 ntBASIC14.51□□□□□ -0.09
CLDN6P56747 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.51□□□□□ -0.09
CLDN6P56747 SAMD11P1-201ENST00000571429 661 ntBASIC14.51□□□□□ -0.09
CLDN6P56747 WDR7-208ENST00000589935 544 ntTSL 4 BASIC14.51□□□□□ -0.09
CLDN6P56747 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN6P56747 AC073352.2-201ENST00000609385 439 ntBASIC14.51□□□□□ -0.09
CLDN6P56747 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CLDN6P56747 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN6P56747 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.51□□□□□ -0.09
CLDN6P56747 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN6P56747 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CLDN6P56747 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CLDN6P56747 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN6P56747 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CLDN6P56747 AL365203.3-201ENST00000609742 2057 ntBASIC14.51□□□□□ -0.09
CLDN6P56747 AC009093.2-202ENST00000620513 2079 ntBASIC14.51□□□□□ -0.09
CLDN6P56747 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN6P56747 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.51□□□□□ -0.09
CLDN6P56747 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CLDN6P56747 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.51□□□□□ -0.09
CLDN6P56747 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN6P56747 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN6P56747 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN6P56747 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN6P56747 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN6P56747 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN6P56747 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CLDN6P56747 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN6P56747 AC009090.5-201ENST00000624886 2285 ntBASIC14.5□□□□□ -0.09
CLDN6P56747 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN6P56747 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN6P56747 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.5□□□□□ -0.09
CLDN6P56747 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.5□□□□□ -0.09
CLDN6P56747 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN6P56747 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN6P56747 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CLDN6P56747 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN6P56747 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.5□□□□□ -0.09
CLDN6P56747 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CLDN6P56747 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN6P56747 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CLDN6P56747 AC132872.4-202ENST00000622924 2756 ntBASIC14.5□□□□□ -0.09
CLDN6P56747 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN6P56747 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CLDN6P56747 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN6P56747 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN6P56747 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC14.5□□□□□ -0.09
CLDN6P56747 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CLDN6P56747 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CLDN6P56747 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN6P56747 AL136309.1-201ENST00000403917 691 ntBASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms