Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KCNQ4P56696 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KCNQ4P56696 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KCNQ4P56696 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KCNQ4P56696 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
KCNQ4P56696 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC19.01■□□□□ 0.63
KCNQ4P56696 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC19.01■□□□□ 0.63
KCNQ4P56696 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
KCNQ4P56696 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19■□□□□ 0.63
KCNQ4P56696 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC19■□□□□ 0.63
KCNQ4P56696 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC19■□□□□ 0.63
KCNQ4P56696 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC19■□□□□ 0.63
KCNQ4P56696 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KCNQ4P56696 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19■□□□□ 0.63
KCNQ4P56696 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KCNQ4P56696 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
KCNQ4P56696 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC19■□□□□ 0.63
KCNQ4P56696 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
KCNQ4P56696 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KCNQ4P56696 RPL5P21-201ENST00000404620 815 ntBASIC19■□□□□ 0.63
KCNQ4P56696 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
KCNQ4P56696 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC19■□□□□ 0.63
KCNQ4P56696 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC19■□□□□ 0.63
KCNQ4P56696 NEU3-207ENST00000534628 746 ntTSL 2 BASIC19■□□□□ 0.63
KCNQ4P56696 AC093752.3-201ENST00000567343 901 ntBASIC19■□□□□ 0.63
KCNQ4P56696 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC19■□□□□ 0.63
KCNQ4P56696 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC19■□□□□ 0.63
KCNQ4P56696 AC087392.5-201ENST00000612517 489 ntBASIC19■□□□□ 0.63
KCNQ4P56696 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC19■□□□□ 0.63
KCNQ4P56696 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC19■□□□□ 0.63
KCNQ4P56696 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
KCNQ4P56696 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19■□□□□ 0.63
KCNQ4P56696 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
KCNQ4P56696 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KCNQ4P56696 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
KCNQ4P56696 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
KCNQ4P56696 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
KCNQ4P56696 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC19■□□□□ 0.63
KCNQ4P56696 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
KCNQ4P56696 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KCNQ4P56696 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC19■□□□□ 0.63
KCNQ4P56696 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KCNQ4P56696 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.99■□□□□ 0.63
KCNQ4P56696 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
KCNQ4P56696 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
KCNQ4P56696 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KCNQ4P56696 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KCNQ4P56696 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KCNQ4P56696 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC18.99■□□□□ 0.63
KCNQ4P56696 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.99■□□□□ 0.63
KCNQ4P56696 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KCNQ4P56696 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KCNQ4P56696 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KCNQ4P56696 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
KCNQ4P56696 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
KCNQ4P56696 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KCNQ4P56696 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC18.99■□□□□ 0.63
KCNQ4P56696 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC18.99■□□□□ 0.63
KCNQ4P56696 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KCNQ4P56696 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC18.99■□□□□ 0.63
KCNQ4P56696 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC18.99■□□□□ 0.63
KCNQ4P56696 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KCNQ4P56696 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC18.99■□□□□ 0.63
KCNQ4P56696 RN7SL596P-201ENST00000582123 288 ntBASIC18.99■□□□□ 0.63
KCNQ4P56696 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC18.99■□□□□ 0.63
KCNQ4P56696 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC18.99■□□□□ 0.63
KCNQ4P56696 RNF146-211ENST00000609447 607 ntTSL 4 BASIC18.99■□□□□ 0.63
KCNQ4P56696 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.99■□□□□ 0.63
KCNQ4P56696 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
KCNQ4P56696 AC092850.2-201ENST00000623821 2697 ntBASIC18.99■□□□□ 0.63
KCNQ4P56696 AC018629.1-201ENST00000623381 1736 ntBASIC18.99■□□□□ 0.63
KCNQ4P56696 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
KCNQ4P56696 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
KCNQ4P56696 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KCNQ4P56696 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.99■□□□□ 0.63
KCNQ4P56696 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KCNQ4P56696 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
KCNQ4P56696 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
KCNQ4P56696 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
KCNQ4P56696 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KCNQ4P56696 KRT18P9-201ENST00000604826 1300 ntBASIC18.99■□□□□ 0.63
KCNQ4P56696 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.99■□□□□ 0.63
KCNQ4P56696 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
KCNQ4P56696 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.98■□□□□ 0.63
KCNQ4P56696 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
KCNQ4P56696 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
KCNQ4P56696 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KCNQ4P56696 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
KCNQ4P56696 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KCNQ4P56696 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.98■□□□□ 0.63
KCNQ4P56696 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.98■□□□□ 0.63
KCNQ4P56696 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KCNQ4P56696 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.98■□□□□ 0.63
KCNQ4P56696 RNA5SP359-201ENST00000364838 113 ntBASIC18.98■□□□□ 0.63
KCNQ4P56696 DUTP3-201ENST00000450025 415 ntBASIC18.98■□□□□ 0.63
KCNQ4P56696 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KCNQ4P56696 AP001184.1-201ENST00000637936 376 ntBASIC18.98■□□□□ 0.63
KCNQ4P56696 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KCNQ4P56696 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.98■□□□□ 0.63
KCNQ4P56696 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms