Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.79□□□□□ -0.04
AP1S2P56377 AC005252.2-201ENST00000624630 1141 ntBASIC14.79□□□□□ -0.04
AP1S2P56377 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.79□□□□□ -0.04
AP1S2P56377 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.79□□□□□ -0.04
AP1S2P56377 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP1S2P56377 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP1S2P56377 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP1S2P56377 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP1S2P56377 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.79□□□□□ -0.04
AP1S2P56377 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
AP1S2P56377 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP1S2P56377 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
AP1S2P56377 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP1S2P56377 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AP1S2P56377 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
AP1S2P56377 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AP1S2P56377 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP1S2P56377 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.78□□□□□ -0.04
AP1S2P56377 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.78□□□□□ -0.04
AP1S2P56377 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AP1S2P56377 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.78□□□□□ -0.04
AP1S2P56377 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP1S2P56377 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AP1S2P56377 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP1S2P56377 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
AP1S2P56377 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP1S2P56377 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.78□□□□□ -0.04
AP1S2P56377 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
AP1S2P56377 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AP1S2P56377 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP1S2P56377 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.78□□□□□ -0.04
AP1S2P56377 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP1S2P56377 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP1S2P56377 CICP14-201ENST00000629111 2732 ntBASIC14.78□□□□□ -0.04
AP1S2P56377 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.78□□□□□ -0.04
AP1S2P56377 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AP1S2P56377 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP1S2P56377 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.78□□□□□ -0.04
AP1S2P56377 KLF2P2-201ENST00000416807 1039 ntBASIC14.78□□□□□ -0.04
AP1S2P56377 CRB3P1-201ENST00000449338 276 ntBASIC14.78□□□□□ -0.04
AP1S2P56377 KRT18P25-201ENST00000508931 1278 ntBASIC14.78□□□□□ -0.04
AP1S2P56377 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP1S2P56377 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
AP1S2P56377 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AP1S2P56377 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.78□□□□□ -0.04
AP1S2P56377 AC009486.1-201ENST00000569860 813 ntBASIC14.78□□□□□ -0.04
AP1S2P56377 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.78□□□□□ -0.04
AP1S2P56377 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.78□□□□□ -0.04
AP1S2P56377 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.78□□□□□ -0.04
AP1S2P56377 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.78□□□□□ -0.04
AP1S2P56377 WFDC1-204ENST00000613603 549 ntBASIC14.78□□□□□ -0.04
AP1S2P56377 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.78□□□□□ -0.04
AP1S2P56377 CU634019.7-201ENST00000624153 1185 ntBASIC14.78□□□□□ -0.04
AP1S2P56377 FP236241.2-201ENST00000624906 1185 ntBASIC14.78□□□□□ -0.04
AP1S2P56377 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.78□□□□□ -0.04
AP1S2P56377 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP1S2P56377 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP1S2P56377 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.78□□□□□ -0.04
AP1S2P56377 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AP1S2P56377 AC018442.1-201ENST00000421439 2061 ntBASIC14.78□□□□□ -0.04
AP1S2P56377 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.78□□□□□ -0.04
AP1S2P56377 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
AP1S2P56377 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
AP1S2P56377 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP1S2P56377 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP1S2P56377 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.78□□□□□ -0.04
AP1S2P56377 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP1S2P56377 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AP1S2P56377 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.77□□□□□ -0.04
AP1S2P56377 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
AP1S2P56377 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
AP1S2P56377 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
AP1S2P56377 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.77□□□□□ -0.04
AP1S2P56377 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
AP1S2P56377 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
AP1S2P56377 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
AP1S2P56377 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.77□□□□□ -0.04
AP1S2P56377 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
AP1S2P56377 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AP1S2P56377 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AP1S2P56377 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.77□□□□□ -0.04
AP1S2P56377 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
AP1S2P56377 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
AP1S2P56377 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
AP1S2P56377 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AP1S2P56377 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
AP1S2P56377 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.77□□□□□ -0.04
AP1S2P56377 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
AP1S2P56377 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
AP1S2P56377 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AP1S2P56377 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.04
AP1S2P56377 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
AP1S2P56377 ACTBP8-201ENST00000403258 1108 ntBASIC14.77□□□□□ -0.05
AP1S2P56377 GIMAP3P-201ENST00000495150 836 ntBASIC14.77□□□□□ -0.05
AP1S2P56377 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.77□□□□□ -0.05
AP1S2P56377 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
AP1S2P56377 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.77□□□□□ -0.05
AP1S2P56377 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.77□□□□□ -0.05
AP1S2P56377 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
AP1S2P56377 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms