Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC4P55056 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
APOC4P55056 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
APOC4P55056 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC4P55056 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC4P55056 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC11.11□□□□□ -0.63
APOC4P55056 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC11.11□□□□□ -0.63
APOC4P55056 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
APOC4P55056 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC4P55056 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
APOC4P55056 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
APOC4P55056 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
APOC4P55056 SNX21-203ENST00000372541 771 ntTSL 2 BASIC11.11□□□□□ -0.63
APOC4P55056 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC4P55056 NDUFAB1P1-201ENST00000404262 460 ntBASIC11.11□□□□□ -0.63
APOC4P55056 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC11.11□□□□□ -0.63
APOC4P55056 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC11.11□□□□□ -0.63
APOC4P55056 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC11.11□□□□□ -0.63
APOC4P55056 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC11.11□□□□□ -0.63
APOC4P55056 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC11.11□□□□□ -0.63
APOC4P55056 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC11.11□□□□□ -0.63
APOC4P55056 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC11.11□□□□□ -0.63
APOC4P55056 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
APOC4P55056 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC11.11□□□□□ -0.63
APOC4P55056 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
APOC4P55056 RN7SL560P-201ENST00000577943 264 ntBASIC11.11□□□□□ -0.63
APOC4P55056 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
APOC4P55056 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
APOC4P55056 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC11.11□□□□□ -0.63
APOC4P55056 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC4P55056 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC4P55056 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC4P55056 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC4P55056 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
APOC4P55056 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC4P55056 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
APOC4P55056 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC4P55056 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC4P55056 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC11.11□□□□□ -0.63
APOC4P55056 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
APOC4P55056 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC11.11□□□□□ -0.63
APOC4P55056 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC4P55056 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC4P55056 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC4P55056 PES1-204ENST00000402284 2144 ntTSL 5 BASIC11.11□□□□□ -0.63
APOC4P55056 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC4P55056 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC4P55056 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC4P55056 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC11.1□□□□□ -0.63
APOC4P55056 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
APOC4P55056 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
APOC4P55056 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC11.1□□□□□ -0.63
APOC4P55056 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
APOC4P55056 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC11.1□□□□□ -0.63
APOC4P55056 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
APOC4P55056 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
APOC4P55056 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC11.1□□□□□ -0.63
APOC4P55056 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
APOC4P55056 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
APOC4P55056 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
APOC4P55056 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
APOC4P55056 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
APOC4P55056 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
APOC4P55056 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
APOC4P55056 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
APOC4P55056 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC11.1□□□□□ -0.63
APOC4P55056 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
APOC4P55056 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
APOC4P55056 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
APOC4P55056 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
APOC4P55056 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
APOC4P55056 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
APOC4P55056 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
APOC4P55056 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
APOC4P55056 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
APOC4P55056 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
APOC4P55056 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
APOC4P55056 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC11.1□□□□□ -0.63
APOC4P55056 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC11.1□□□□□ -0.63
APOC4P55056 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC11.1□□□□□ -0.63
APOC4P55056 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
APOC4P55056 FTLP10-202ENST00000505798 471 ntBASIC11.1□□□□□ -0.63
APOC4P55056 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC11.1□□□□□ -0.63
APOC4P55056 AGER-214ENST00000538695 487 ntTSL 2 BASIC11.1□□□□□ -0.63
APOC4P55056 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC11.1□□□□□ -0.63
APOC4P55056 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC11.1□□□□□ -0.63
APOC4P55056 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC11.1□□□□□ -0.63
APOC4P55056 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC11.1□□□□□ -0.63
APOC4P55056 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC11.1□□□□□ -0.63
APOC4P55056 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
APOC4P55056 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC11.1□□□□□ -0.63
APOC4P55056 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC11.1□□□□□ -0.63
APOC4P55056 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
APOC4P55056 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
APOC4P55056 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
APOC4P55056 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
APOC4P55056 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC11.1□□□□□ -0.63
APOC4P55056 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC11.1□□□□□ -0.63
APOC4P55056 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
APOC4P55056 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC11.1□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms