Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.8■□□□□ 0.44
CACNB3P54284 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC17.8■□□□□ 0.44
CACNB3P54284 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CACNB3P54284 PUDPP3-201ENST00000445368 636 ntBASIC17.8■□□□□ 0.44
CACNB3P54284 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.8■□□□□ 0.44
CACNB3P54284 AC132192.2-201ENST00000596206 1147 ntBASIC17.8■□□□□ 0.44
CACNB3P54284 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
CACNB3P54284 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.8■□□□□ 0.44
CACNB3P54284 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC17.8■□□□□ 0.44
CACNB3P54284 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CACNB3P54284 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CACNB3P54284 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CACNB3P54284 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CACNB3P54284 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CACNB3P54284 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CACNB3P54284 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CACNB3P54284 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CACNB3P54284 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CACNB3P54284 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CACNB3P54284 AC136759.1-202ENST00000530858 2194 ntBASIC17.8■□□□□ 0.44
CACNB3P54284 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.8■□□□□ 0.44
CACNB3P54284 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.8■□□□□ 0.44
CACNB3P54284 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.8■□□□□ 0.44
CACNB3P54284 AC087481.3-201ENST00000602886 1894 ntBASIC17.8■□□□□ 0.44
CACNB3P54284 AC020658.6-201ENST00000623564 1870 ntBASIC17.8■□□□□ 0.44
CACNB3P54284 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CACNB3P54284 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CACNB3P54284 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.8■□□□□ 0.44
CACNB3P54284 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CACNB3P54284 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.8■□□□□ 0.44
CACNB3P54284 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CACNB3P54284 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CACNB3P54284 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CACNB3P54284 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CACNB3P54284 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CACNB3P54284 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.79■□□□□ 0.44
CACNB3P54284 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.79■□□□□ 0.44
CACNB3P54284 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CACNB3P54284 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.79■□□□□ 0.44
CACNB3P54284 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CACNB3P54284 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
CACNB3P54284 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.79■□□□□ 0.44
CACNB3P54284 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
CACNB3P54284 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CACNB3P54284 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CACNB3P54284 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CACNB3P54284 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.79■□□□□ 0.44
CACNB3P54284 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CACNB3P54284 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CACNB3P54284 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CACNB3P54284 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC17.79■□□□□ 0.44
CACNB3P54284 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CACNB3P54284 ISCA2P1-201ENST00000425548 448 ntBASIC17.79■□□□□ 0.44
CACNB3P54284 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC17.79■□□□□ 0.44
CACNB3P54284 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CACNB3P54284 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.79■□□□□ 0.44
CACNB3P54284 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.79■□□□□ 0.44
CACNB3P54284 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC17.79■□□□□ 0.44
CACNB3P54284 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CACNB3P54284 AC005962.1-201ENST00000584100 773 ntBASIC17.79■□□□□ 0.44
CACNB3P54284 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC17.79■□□□□ 0.44
CACNB3P54284 AC020922.3-201ENST00000595064 547 ntBASIC17.79■□□□□ 0.44
CACNB3P54284 AP000346.4-201ENST00000614827 381 ntBASIC17.79■□□□□ 0.44
CACNB3P54284 AC023090.2-201ENST00000625182 2110 ntBASIC17.79■□□□□ 0.44
CACNB3P54284 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CACNB3P54284 AC006058.4-201ENST00000624016 1670 ntBASIC17.79■□□□□ 0.44
CACNB3P54284 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CACNB3P54284 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CACNB3P54284 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CACNB3P54284 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.79■□□□□ 0.44
CACNB3P54284 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CACNB3P54284 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.79■□□□□ 0.44
CACNB3P54284 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
CACNB3P54284 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CACNB3P54284 AC023024.2-201ENST00000623561 1993 ntBASIC17.79■□□□□ 0.44
CACNB3P54284 AC112693.3-201ENST00000624819 1983 ntBASIC17.79■□□□□ 0.44
CACNB3P54284 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CACNB3P54284 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CACNB3P54284 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CACNB3P54284 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CACNB3P54284 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CACNB3P54284 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CACNB3P54284 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CACNB3P54284 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CACNB3P54284 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CACNB3P54284 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CACNB3P54284 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.78■□□□□ 0.44
CACNB3P54284 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CACNB3P54284 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CACNB3P54284 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CACNB3P54284 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CACNB3P54284 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CACNB3P54284 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CACNB3P54284 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.78■□□□□ 0.44
CACNB3P54284 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CACNB3P54284 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CACNB3P54284 PARVG-202ENST00000415224 999 ntTSL 2 BASIC17.78■□□□□ 0.44
CACNB3P54284 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CACNB3P54284 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC17.78■□□□□ 0.44
CACNB3P54284 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms