Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 KRT8P22-201ENST00000562317 1415 ntBASIC16.68■□□□□ 0.26
PMS1P54277 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
PMS1P54277 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PMS1P54277 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PMS1P54277 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PMS1P54277 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.68■□□□□ 0.26
PMS1P54277 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PMS1P54277 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PMS1P54277 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PMS1P54277 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PMS1P54277 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PMS1P54277 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.67■□□□□ 0.26
PMS1P54277 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PMS1P54277 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PMS1P54277 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PMS1P54277 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PMS1P54277 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PMS1P54277 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PMS1P54277 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PMS1P54277 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.67■□□□□ 0.26
PMS1P54277 AL139094.1-201ENST00000405549 1188 ntBASIC16.67■□□□□ 0.26
PMS1P54277 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.67■□□□□ 0.26
PMS1P54277 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.67■□□□□ 0.26
PMS1P54277 AC134915.1-201ENST00000426461 574 ntBASIC16.67■□□□□ 0.26
PMS1P54277 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.67■□□□□ 0.26
PMS1P54277 AC092552.1-201ENST00000547243 906 ntBASIC16.67■□□□□ 0.26
PMS1P54277 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.67■□□□□ 0.26
PMS1P54277 DUX4L47-201ENST00000566374 394 ntBASIC16.67■□□□□ 0.26
PMS1P54277 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.67■□□□□ 0.26
PMS1P54277 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.67■□□□□ 0.26
PMS1P54277 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PMS1P54277 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.67■□□□□ 0.26
PMS1P54277 AC007431.3-201ENST00000623221 587 ntBASIC16.67■□□□□ 0.26
PMS1P54277 BX539320.1-201ENST00000623759 877 ntBASIC16.67■□□□□ 0.26
PMS1P54277 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.67■□□□□ 0.26
PMS1P54277 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.67■□□□□ 0.26
PMS1P54277 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PMS1P54277 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.67■□□□□ 0.26
PMS1P54277 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PMS1P54277 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PMS1P54277 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
PMS1P54277 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PMS1P54277 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PMS1P54277 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PMS1P54277 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PMS1P54277 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PMS1P54277 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PMS1P54277 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.67■□□□□ 0.26
PMS1P54277 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PMS1P54277 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PMS1P54277 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PMS1P54277 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PMS1P54277 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PMS1P54277 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PMS1P54277 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PMS1P54277 AL354702.1-201ENST00000442006 1960 ntBASIC16.66■□□□□ 0.26
PMS1P54277 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.66■□□□□ 0.26
PMS1P54277 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.66■□□□□ 0.26
PMS1P54277 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PMS1P54277 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PMS1P54277 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PMS1P54277 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PMS1P54277 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PMS1P54277 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.66■□□□□ 0.26
PMS1P54277 C1QBPP1-201ENST00000400117 770 ntBASIC16.66■□□□□ 0.26
PMS1P54277 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PMS1P54277 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.66■□□□□ 0.26
PMS1P54277 RPL13AP25-201ENST00000484130 612 ntBASIC16.66■□□□□ 0.26
PMS1P54277 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.66■□□□□ 0.26
PMS1P54277 RNA5SP421-201ENST00000516864 134 ntBASIC16.66■□□□□ 0.26
PMS1P54277 AP001582.1-201ENST00000525856 295 ntBASIC16.66■□□□□ 0.26
PMS1P54277 AC123567.1-201ENST00000548294 1261 ntBASIC16.66■□□□□ 0.26
PMS1P54277 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.66■□□□□ 0.26
PMS1P54277 AC093726.1-201ENST00000608064 963 ntBASIC16.66■□□□□ 0.26
PMS1P54277 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
PMS1P54277 AC008761.3-201ENST00000624803 892 ntBASIC16.66■□□□□ 0.26
PMS1P54277 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.66■□□□□ 0.26
PMS1P54277 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PMS1P54277 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PMS1P54277 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
PMS1P54277 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PMS1P54277 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC16.66■□□□□ 0.26
PMS1P54277 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.66■□□□□ 0.26
PMS1P54277 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PMS1P54277 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.66■□□□□ 0.26
PMS1P54277 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PMS1P54277 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PMS1P54277 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
PMS1P54277 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PMS1P54277 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.66■□□□□ 0.26
PMS1P54277 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.66■□□□□ 0.26
PMS1P54277 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC16.66■□□□□ 0.26
PMS1P54277 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.66■□□□□ 0.26
PMS1P54277 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PMS1P54277 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.65■□□□□ 0.26
PMS1P54277 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PMS1P54277 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.65■□□□□ 0.26
PMS1P54277 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PMS1P54277 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PMS1P54277 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms