Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SLC25A1P53007 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.48□□□□□ -0.25
SLC25A1P53007 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SLC25A1P53007 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SLC25A1P53007 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SLC25A1P53007 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SLC25A1P53007 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
SLC25A1P53007 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
SLC25A1P53007 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SLC25A1P53007 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SLC25A1P53007 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.48□□□□□ -0.25
SLC25A1P53007 SPDYE18-201ENST00000510091 1050 ntBASIC13.48□□□□□ -0.25
SLC25A1P53007 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.48□□□□□ -0.25
SLC25A1P53007 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.48□□□□□ -0.25
SLC25A1P53007 IGHV3-42-201ENST00000520410 361 ntBASIC13.48□□□□□ -0.25
SLC25A1P53007 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.48□□□□□ -0.25
SLC25A1P53007 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.48□□□□□ -0.25
SLC25A1P53007 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.48□□□□□ -0.25
SLC25A1P53007 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.48□□□□□ -0.25
SLC25A1P53007 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.48□□□□□ -0.25
SLC25A1P53007 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
SLC25A1P53007 AL049840.4-201ENST00000602422 811 ntBASIC13.48□□□□□ -0.25
SLC25A1P53007 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.48□□□□□ -0.25
SLC25A1P53007 AL662799.1-202ENST00000614205 422 ntBASIC13.48□□□□□ -0.25
SLC25A1P53007 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
SLC25A1P53007 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SLC25A1P53007 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SLC25A1P53007 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SLC25A1P53007 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SLC25A1P53007 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SLC25A1P53007 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.48□□□□□ -0.25
SLC25A1P53007 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SLC25A1P53007 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.48□□□□□ -0.25
SLC25A1P53007 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SLC25A1P53007 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SLC25A1P53007 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SLC25A1P53007 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SLC25A1P53007 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SLC25A1P53007 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.48□□□□□ -0.25
SLC25A1P53007 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
SLC25A1P53007 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.48□□□□□ -0.25
SLC25A1P53007 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
SLC25A1P53007 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SLC25A1P53007 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SLC25A1P53007 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.47□□□□□ -0.25
SLC25A1P53007 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.47□□□□□ -0.25
SLC25A1P53007 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SLC25A1P53007 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SLC25A1P53007 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SLC25A1P53007 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SLC25A1P53007 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
SLC25A1P53007 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
SLC25A1P53007 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SLC25A1P53007 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SLC25A1P53007 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SLC25A1P53007 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
SLC25A1P53007 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SLC25A1P53007 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.47□□□□□ -0.25
SLC25A1P53007 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SLC25A1P53007 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
SLC25A1P53007 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SLC25A1P53007 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.47□□□□□ -0.25
SLC25A1P53007 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SLC25A1P53007 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SLC25A1P53007 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.47□□□□□ -0.25
SLC25A1P53007 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.47□□□□□ -0.25
SLC25A1P53007 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SLC25A1P53007 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.47□□□□□ -0.25
SLC25A1P53007 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.47□□□□□ -0.25
SLC25A1P53007 RN7SL399P-201ENST00000471648 279 ntBASIC13.47□□□□□ -0.25
SLC25A1P53007 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SLC25A1P53007 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.47□□□□□ -0.25
SLC25A1P53007 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.47□□□□□ -0.25
SLC25A1P53007 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SLC25A1P53007 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.47□□□□□ -0.25
SLC25A1P53007 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.47□□□□□ -0.25
SLC25A1P53007 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
SLC25A1P53007 AC008738.7-201ENST00000609744 511 ntBASIC13.47□□□□□ -0.25
SLC25A1P53007 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
SLC25A1P53007 AC004840.1-201ENST00000636359 365 ntBASIC13.47□□□□□ -0.25
SLC25A1P53007 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SLC25A1P53007 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SLC25A1P53007 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SLC25A1P53007 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.47□□□□□ -0.25
SLC25A1P53007 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SLC25A1P53007 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SLC25A1P53007 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SLC25A1P53007 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SLC25A1P53007 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SLC25A1P53007 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.47□□□□□ -0.25
SLC25A1P53007 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SLC25A1P53007 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SLC25A1P53007 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SLC25A1P53007 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SLC25A1P53007 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SLC25A1P53007 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SLC25A1P53007 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.47□□□□□ -0.25
SLC25A1P53007 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SLC25A1P53007 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SLC25A1P53007 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms