Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC26.21■■□□□ 1.79
SMARCA4P51532 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC26.21■■□□□ 1.79
SMARCA4P51532 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SMARCA4P51532 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
SMARCA4P51532 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC26.21■■□□□ 1.79
SMARCA4P51532 AC006372.4-201ENST00000624122 1543 ntBASIC26.21■■□□□ 1.79
SMARCA4P51532 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
SMARCA4P51532 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
SMARCA4P51532 RN7SL564P-201ENST00000496309 250 ntBASIC26.21■■□□□ 1.79
SMARCA4P51532 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
SMARCA4P51532 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SMARCA4P51532 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
SMARCA4P51532 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.79
SMARCA4P51532 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
SMARCA4P51532 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC26.2■■□□□ 1.79
SMARCA4P51532 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
SMARCA4P51532 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC26.2■■□□□ 1.79
SMARCA4P51532 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.79
SMARCA4P51532 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC26.2■■□□□ 1.79
SMARCA4P51532 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
SMARCA4P51532 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
SMARCA4P51532 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.78
SMARCA4P51532 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC26.2■■□□□ 1.78
SMARCA4P51532 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SMARCA4P51532 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
SMARCA4P51532 PEBP1P2-201ENST00000603980 558 ntBASIC26.2■■□□□ 1.78
SMARCA4P51532 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
SMARCA4P51532 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SMARCA4P51532 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SMARCA4P51532 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
SMARCA4P51532 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SMARCA4P51532 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SMARCA4P51532 WASH3P-207ENST00000560956 1394 ntBASIC26.19■■□□□ 1.78
SMARCA4P51532 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SMARCA4P51532 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
SMARCA4P51532 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SMARCA4P51532 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC26.19■■□□□ 1.78
SMARCA4P51532 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC26.19■■□□□ 1.78
SMARCA4P51532 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC26.19■■□□□ 1.78
SMARCA4P51532 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SMARCA4P51532 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC26.19■■□□□ 1.78
SMARCA4P51532 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SMARCA4P51532 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC26.19■■□□□ 1.78
SMARCA4P51532 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SMARCA4P51532 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC26.19■■□□□ 1.78
SMARCA4P51532 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC26.19■■□□□ 1.78
SMARCA4P51532 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
SMARCA4P51532 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SMARCA4P51532 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SMARCA4P51532 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
SMARCA4P51532 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC26.19■■□□□ 1.78
SMARCA4P51532 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC26.19■■□□□ 1.78
SMARCA4P51532 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
SMARCA4P51532 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
SMARCA4P51532 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC26.18■■□□□ 1.78
SMARCA4P51532 FAM90A21P-201ENST00000510875 1396 ntBASIC26.18■■□□□ 1.78
SMARCA4P51532 FAM90A15P-201ENST00000514465 1395 ntBASIC26.18■■□□□ 1.78
SMARCA4P51532 FAM90A6P-201ENST00000515148 1394 ntBASIC26.18■■□□□ 1.78
SMARCA4P51532 FAM90A16P-201ENST00000526662 1395 ntBASIC26.18■■□□□ 1.78
SMARCA4P51532 FAM90A9P-201ENST00000527940 1395 ntBASIC26.18■■□□□ 1.78
SMARCA4P51532 FAM90A5P-201ENST00000528738 1395 ntBASIC26.18■■□□□ 1.78
SMARCA4P51532 FAM90A14P-201ENST00000530386 1395 ntBASIC26.18■■□□□ 1.78
SMARCA4P51532 FAM90A13P-201ENST00000534703 1395 ntBASIC26.18■■□□□ 1.78
SMARCA4P51532 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SMARCA4P51532 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC26.18■■□□□ 1.78
SMARCA4P51532 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC26.18■■□□□ 1.78
SMARCA4P51532 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
SMARCA4P51532 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
SMARCA4P51532 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC26.18■■□□□ 1.78
SMARCA4P51532 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC26.18■■□□□ 1.78
SMARCA4P51532 AC018638.5-201ENST00000450885 754 ntBASIC26.18■■□□□ 1.78
SMARCA4P51532 RN7SL23P-201ENST00000484055 275 ntBASIC26.18■■□□□ 1.78
SMARCA4P51532 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC26.18■■□□□ 1.78
SMARCA4P51532 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC26.18■■□□□ 1.78
SMARCA4P51532 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC26.18■■□□□ 1.78
SMARCA4P51532 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
SMARCA4P51532 PCDHGB8P-201ENST00000502926 1973 ntBASIC26.18■■□□□ 1.78
SMARCA4P51532 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SMARCA4P51532 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC26.18■■□□□ 1.78
SMARCA4P51532 WARS-232ENST00000556645 2508 ntTSL 5 BASIC26.18■■□□□ 1.78
SMARCA4P51532 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC26.18■■□□□ 1.78
SMARCA4P51532 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SMARCA4P51532 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC26.18■■□□□ 1.78
SMARCA4P51532 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC26.18■■□□□ 1.78
SMARCA4P51532 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
SMARCA4P51532 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SMARCA4P51532 CTBP2P8-201ENST00000422584 1330 ntBASIC26.18■■□□□ 1.78
SMARCA4P51532 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC26.18■■□□□ 1.78
SMARCA4P51532 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC26.18■■□□□ 1.78
SMARCA4P51532 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
SMARCA4P51532 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SMARCA4P51532 RNVU1-8-201ENST00000364272 125 ntBASIC26.17■■□□□ 1.78
SMARCA4P51532 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SMARCA4P51532 NME4-203ENST00000397722 1232 ntTSL 2 BASIC26.17■■□□□ 1.78
SMARCA4P51532 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC26.17■■□□□ 1.78
SMARCA4P51532 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC26.17■■□□□ 1.78
SMARCA4P51532 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC26.17■■□□□ 1.78
SMARCA4P51532 HMGB1P24-201ENST00000611897 328 ntBASIC26.17■■□□□ 1.78
SMARCA4P51532 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
SMARCA4P51532 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms