Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 RN7SL692P-201ENST00000464677 288 ntBASIC17.81■□□□□ 0.44
MRE11P49959 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MRE11P49959 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.81■□□□□ 0.44
MRE11P49959 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.81■□□□□ 0.44
MRE11P49959 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.81■□□□□ 0.44
MRE11P49959 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
MRE11P49959 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.81■□□□□ 0.44
MRE11P49959 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
MRE11P49959 AL591122.2-201ENST00000624125 1853 ntBASIC17.81■□□□□ 0.44
MRE11P49959 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.81■□□□□ 0.44
MRE11P49959 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC17.81■□□□□ 0.44
MRE11P49959 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MRE11P49959 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC17.81■□□□□ 0.44
MRE11P49959 MAPT-IT1-201ENST00000624111 3016 ntBASIC17.81■□□□□ 0.44
MRE11P49959 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC17.81■□□□□ 0.44
MRE11P49959 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MRE11P49959 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC17.8■□□□□ 0.44
MRE11P49959 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MRE11P49959 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC17.8■□□□□ 0.44
MRE11P49959 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MRE11P49959 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
MRE11P49959 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MRE11P49959 AC023090.2-201ENST00000625182 2110 ntBASIC17.8■□□□□ 0.44
MRE11P49959 AC129492.6-201ENST00000611383 1305 ntBASIC17.8■□□□□ 0.44
MRE11P49959 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.8■□□□□ 0.44
MRE11P49959 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
MRE11P49959 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MRE11P49959 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.8■□□□□ 0.44
MRE11P49959 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MRE11P49959 BX005266.1-201ENST00000473402 457 ntBASIC17.8■□□□□ 0.44
MRE11P49959 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.8■□□□□ 0.44
MRE11P49959 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.8■□□□□ 0.44
MRE11P49959 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.8■□□□□ 0.44
MRE11P49959 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
MRE11P49959 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
MRE11P49959 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MRE11P49959 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.8■□□□□ 0.44
MRE11P49959 HADH-202ENST00000403312 1752 ntTSL 5 BASIC17.8■□□□□ 0.44
MRE11P49959 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC17.8■□□□□ 0.44
MRE11P49959 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
MRE11P49959 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
MRE11P49959 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MRE11P49959 Z82170.1-201ENST00000625081 3192 ntBASIC17.8■□□□□ 0.44
MRE11P49959 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC17.8■□□□□ 0.44
MRE11P49959 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MRE11P49959 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MRE11P49959 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MRE11P49959 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC17.8■□□□□ 0.44
MRE11P49959 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MRE11P49959 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC17.79■□□□□ 0.44
MRE11P49959 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MRE11P49959 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
MRE11P49959 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.79■□□□□ 0.44
MRE11P49959 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
MRE11P49959 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC17.79■□□□□ 0.44
MRE11P49959 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
MRE11P49959 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC17.79■□□□□ 0.44
MRE11P49959 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.79■□□□□ 0.44
MRE11P49959 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.79■□□□□ 0.44
MRE11P49959 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.79■□□□□ 0.44
MRE11P49959 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.79■□□□□ 0.44
MRE11P49959 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.79■□□□□ 0.44
MRE11P49959 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.79■□□□□ 0.44
MRE11P49959 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.79■□□□□ 0.44
MRE11P49959 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC17.79■□□□□ 0.44
MRE11P49959 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.79■□□□□ 0.44
MRE11P49959 AL132655.2-201ENST00000596276 594 ntBASIC17.79■□□□□ 0.44
MRE11P49959 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MRE11P49959 AC015909.5-201ENST00000624336 2266 ntBASIC17.79■□□□□ 0.44
MRE11P49959 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MRE11P49959 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
MRE11P49959 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC17.79■□□□□ 0.44
MRE11P49959 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.79■□□□□ 0.44
MRE11P49959 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MRE11P49959 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.79■□□□□ 0.44
MRE11P49959 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
MRE11P49959 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MRE11P49959 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
MRE11P49959 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
MRE11P49959 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.79■□□□□ 0.44
MRE11P49959 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MRE11P49959 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MRE11P49959 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.78■□□□□ 0.44
MRE11P49959 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
MRE11P49959 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MRE11P49959 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MRE11P49959 AC012569.1-201ENST00000591191 1524 ntBASIC17.78■□□□□ 0.44
MRE11P49959 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MRE11P49959 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
MRE11P49959 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MRE11P49959 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MRE11P49959 AC018442.1-201ENST00000421439 2061 ntBASIC17.78■□□□□ 0.44
MRE11P49959 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.78■□□□□ 0.44
MRE11P49959 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MRE11P49959 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MRE11P49959 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MRE11P49959 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
MRE11P49959 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MRE11P49959 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.78■□□□□ 0.44
MRE11P49959 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms