Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRIM2P49643 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.53□□□□□ -0.08
PRIM2P49643 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRIM2P49643 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRIM2P49643 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRIM2P49643 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRIM2P49643 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PRIM2P49643 ACE3P-201ENST00000423435 1973 ntBASIC14.53□□□□□ -0.08
PRIM2P49643 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PRIM2P49643 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
PRIM2P49643 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PRIM2P49643 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
PRIM2P49643 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
PRIM2P49643 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PRIM2P49643 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.08
PRIM2P49643 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.52□□□□□ -0.08
PRIM2P49643 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.52□□□□□ -0.08
PRIM2P49643 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
PRIM2P49643 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
PRIM2P49643 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.52□□□□□ -0.08
PRIM2P49643 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PRIM2P49643 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.52□□□□□ -0.08
PRIM2P49643 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
PRIM2P49643 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.52□□□□□ -0.08
PRIM2P49643 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.52□□□□□ -0.09
PRIM2P49643 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.52□□□□□ -0.09
PRIM2P49643 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.52□□□□□ -0.09
PRIM2P49643 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.52□□□□□ -0.09
PRIM2P49643 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.52□□□□□ -0.09
PRIM2P49643 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.52□□□□□ -0.09
PRIM2P49643 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.09
PRIM2P49643 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
PRIM2P49643 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.52□□□□□ -0.09
PRIM2P49643 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PRIM2P49643 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.52□□□□□ -0.09
PRIM2P49643 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.52□□□□□ -0.09
PRIM2P49643 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.52□□□□□ -0.09
PRIM2P49643 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PRIM2P49643 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.52□□□□□ -0.09
PRIM2P49643 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.52□□□□□ -0.09
PRIM2P49643 AC011467.4-201ENST00000594891 528 ntBASIC14.52□□□□□ -0.09
PRIM2P49643 AC093512.1-201ENST00000617969 520 ntBASIC14.52□□□□□ -0.09
PRIM2P49643 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.52□□□□□ -0.09
PRIM2P49643 REXO1L2P-201ENST00000425429 2069 ntBASIC14.52□□□□□ -0.09
PRIM2P49643 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.52□□□□□ -0.09
PRIM2P49643 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PRIM2P49643 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
PRIM2P49643 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
PRIM2P49643 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
PRIM2P49643 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PRIM2P49643 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PRIM2P49643 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PRIM2P49643 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.52□□□□□ -0.09
PRIM2P49643 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PRIM2P49643 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PRIM2P49643 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PRIM2P49643 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.52□□□□□ -0.09
PRIM2P49643 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PRIM2P49643 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PRIM2P49643 AL121723.1-201ENST00000445194 1519 ntBASIC14.51□□□□□ -0.09
PRIM2P49643 BTBD7P1-201ENST00000447253 1453 ntBASIC14.51□□□□□ -0.09
PRIM2P49643 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PRIM2P49643 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PRIM2P49643 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PRIM2P49643 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
PRIM2P49643 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
PRIM2P49643 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
PRIM2P49643 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PRIM2P49643 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
PRIM2P49643 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PRIM2P49643 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PRIM2P49643 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PRIM2P49643 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PRIM2P49643 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PRIM2P49643 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PRIM2P49643 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PRIM2P49643 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
PRIM2P49643 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PRIM2P49643 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.51□□□□□ -0.09
PRIM2P49643 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PRIM2P49643 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PRIM2P49643 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PRIM2P49643 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.51□□□□□ -0.09
PRIM2P49643 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
PRIM2P49643 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.51□□□□□ -0.09
PRIM2P49643 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PRIM2P49643 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PRIM2P49643 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PRIM2P49643 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
PRIM2P49643 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.51□□□□□ -0.09
PRIM2P49643 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
PRIM2P49643 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PRIM2P49643 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PRIM2P49643 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.51□□□□□ -0.09
PRIM2P49643 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PRIM2P49643 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PRIM2P49643 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PRIM2P49643 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PRIM2P49643 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
PRIM2P49643 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms