Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.59□□□□□ -0.07
SLC6A12P48065 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
SLC6A12P48065 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SLC6A12P48065 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SLC6A12P48065 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.59□□□□□ -0.07
SLC6A12P48065 MIR5189-201ENST00000577370 114 ntBASIC14.59□□□□□ -0.07
SLC6A12P48065 AC004466.1-201ENST00000599515 1080 ntBASIC14.59□□□□□ -0.07
SLC6A12P48065 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.59□□□□□ -0.07
SLC6A12P48065 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.59□□□□□ -0.07
SLC6A12P48065 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SLC6A12P48065 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
SLC6A12P48065 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC6A12P48065 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC6A12P48065 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
SLC6A12P48065 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.59□□□□□ -0.07
SLC6A12P48065 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC6A12P48065 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SLC6A12P48065 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC6A12P48065 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC6A12P48065 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SLC6A12P48065 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.59□□□□□ -0.07
SLC6A12P48065 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SLC6A12P48065 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SLC6A12P48065 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
SLC6A12P48065 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
SLC6A12P48065 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC6A12P48065 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
SLC6A12P48065 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
SLC6A12P48065 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SLC6A12P48065 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
SLC6A12P48065 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SLC6A12P48065 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.07
SLC6A12P48065 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SLC6A12P48065 AL354702.1-201ENST00000442006 1960 ntBASIC14.58□□□□□ -0.07
SLC6A12P48065 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SLC6A12P48065 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
SLC6A12P48065 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SLC6A12P48065 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SLC6A12P48065 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC6A12P48065 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SLC6A12P48065 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
SLC6A12P48065 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.58□□□□□ -0.08
SLC6A12P48065 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.58□□□□□ -0.08
SLC6A12P48065 AP001267.2-201ENST00000532619 2086 ntBASIC14.58□□□□□ -0.08
SLC6A12P48065 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC6A12P48065 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC6A12P48065 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SLC6A12P48065 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC6A12P48065 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC6A12P48065 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC6A12P48065 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC6A12P48065 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC6A12P48065 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC6A12P48065 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.58□□□□□ -0.08
SLC6A12P48065 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.58□□□□□ -0.08
SLC6A12P48065 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
SLC6A12P48065 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.58□□□□□ -0.08
SLC6A12P48065 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC6A12P48065 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC6A12P48065 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SLC6A12P48065 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC6A12P48065 AC012441.1-201ENST00000446669 685 ntBASIC14.58□□□□□ -0.08
SLC6A12P48065 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.58□□□□□ -0.08
SLC6A12P48065 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.58□□□□□ -0.08
SLC6A12P48065 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SLC6A12P48065 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.58□□□□□ -0.08
SLC6A12P48065 MIR3197-201ENST00000582241 73 ntBASIC14.58□□□□□ -0.08
SLC6A12P48065 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.58□□□□□ -0.08
SLC6A12P48065 AC092364.2-202ENST00000597012 1073 ntBASIC14.58□□□□□ -0.08
SLC6A12P48065 AC010319.3-201ENST00000597028 470 ntBASIC14.58□□□□□ -0.08
SLC6A12P48065 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.58□□□□□ -0.08
SLC6A12P48065 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.58□□□□□ -0.08
SLC6A12P48065 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
SLC6A12P48065 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.58□□□□□ -0.08
SLC6A12P48065 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.58□□□□□ -0.08
SLC6A12P48065 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.58□□□□□ -0.08
SLC6A12P48065 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
SLC6A12P48065 AC005089.1-201ENST00000619486 2241 ntBASIC14.58□□□□□ -0.08
SLC6A12P48065 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC6A12P48065 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC6A12P48065 AC067930.6-201ENST00000623257 4947 ntBASIC14.58□□□□□ -0.08
SLC6A12P48065 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
SLC6A12P48065 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC6A12P48065 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SLC6A12P48065 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SLC6A12P48065 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.58□□□□□ -0.08
SLC6A12P48065 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.58□□□□□ -0.08
SLC6A12P48065 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC6A12P48065 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SLC6A12P48065 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.57□□□□□ -0.08
SLC6A12P48065 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC6A12P48065 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.57□□□□□ -0.08
SLC6A12P48065 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.57□□□□□ -0.08
SLC6A12P48065 AC003102.2-201ENST00000589195 1469 ntBASIC14.57□□□□□ -0.08
SLC6A12P48065 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.57□□□□□ -0.08
SLC6A12P48065 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC6A12P48065 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC6A12P48065 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.57□□□□□ -0.08
SLC6A12P48065 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SLC6A12P48065 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms