Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC16.05■□□□□ 0.16
BRCC3P46736 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BRCC3P46736 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.05■□□□□ 0.16
BRCC3P46736 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.05■□□□□ 0.16
BRCC3P46736 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.05■□□□□ 0.16
BRCC3P46736 AC007663.3-201ENST00000609632 465 ntBASIC16.05■□□□□ 0.16
BRCC3P46736 AC002472.3-201ENST00000640124 621 ntBASIC16.05■□□□□ 0.16
BRCC3P46736 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.05■□□□□ 0.16
BRCC3P46736 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.05■□□□□ 0.16
BRCC3P46736 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.05■□□□□ 0.16
BRCC3P46736 AC138035.3-201ENST00000622706 2791 ntBASIC16.05■□□□□ 0.16
BRCC3P46736 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BRCC3P46736 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
BRCC3P46736 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.05■□□□□ 0.16
BRCC3P46736 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.05■□□□□ 0.16
BRCC3P46736 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
BRCC3P46736 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BRCC3P46736 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.05■□□□□ 0.16
BRCC3P46736 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC16.05■□□□□ 0.16
BRCC3P46736 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BRCC3P46736 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.05■□□□□ 0.16
BRCC3P46736 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRCC3P46736 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BRCC3P46736 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.04■□□□□ 0.16
BRCC3P46736 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
BRCC3P46736 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRCC3P46736 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BRCC3P46736 AC023090.2-201ENST00000625182 2110 ntBASIC16.04■□□□□ 0.16
BRCC3P46736 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.04■□□□□ 0.16
BRCC3P46736 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRCC3P46736 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRCC3P46736 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
BRCC3P46736 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRCC3P46736 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRCC3P46736 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BRCC3P46736 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BRCC3P46736 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BRCC3P46736 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
BRCC3P46736 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BRCC3P46736 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BRCC3P46736 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BRCC3P46736 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.04■□□□□ 0.16
BRCC3P46736 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRCC3P46736 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
BRCC3P46736 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.04■□□□□ 0.16
BRCC3P46736 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BRCC3P46736 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRCC3P46736 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.04■□□□□ 0.16
BRCC3P46736 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
BRCC3P46736 AL606495.2-201ENST00000605867 535 ntBASIC16.04■□□□□ 0.16
BRCC3P46736 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BRCC3P46736 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
BRCC3P46736 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRCC3P46736 AC068587.6-202ENST00000641839 5619 ntBASIC16.04■□□□□ 0.16
BRCC3P46736 AC105917.1-201ENST00000506637 2539 ntBASIC16.04■□□□□ 0.16
BRCC3P46736 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRCC3P46736 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.04■□□□□ 0.16
BRCC3P46736 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRCC3P46736 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRCC3P46736 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.04■□□□□ 0.16
BRCC3P46736 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
BRCC3P46736 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.03■□□□□ 0.16
BRCC3P46736 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRCC3P46736 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRCC3P46736 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BRCC3P46736 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.03■□□□□ 0.16
BRCC3P46736 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRCC3P46736 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
BRCC3P46736 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BRCC3P46736 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRCC3P46736 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.03■□□□□ 0.16
BRCC3P46736 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRCC3P46736 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRCC3P46736 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRCC3P46736 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.03■□□□□ 0.16
BRCC3P46736 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BRCC3P46736 AL354877.1-201ENST00000424412 413 ntBASIC16.03■□□□□ 0.16
BRCC3P46736 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.03■□□□□ 0.16
BRCC3P46736 ARTN-209ENST00000479128 471 ntTSL 3 BASIC16.03■□□□□ 0.16
BRCC3P46736 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.03■□□□□ 0.16
BRCC3P46736 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.03■□□□□ 0.16
BRCC3P46736 MIR4783-201ENST00000580343 82 ntBASIC16.03■□□□□ 0.16
BRCC3P46736 NKG7-204ENST00000595217 816 ntTSL 2 BASIC16.03■□□□□ 0.16
BRCC3P46736 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BRCC3P46736 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRCC3P46736 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRCC3P46736 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRCC3P46736 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
BRCC3P46736 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRCC3P46736 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRCC3P46736 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
BRCC3P46736 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRCC3P46736 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
BRCC3P46736 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRCC3P46736 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
BRCC3P46736 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BRCC3P46736 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
BRCC3P46736 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.02■□□□□ 0.16
BRCC3P46736 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.02■□□□□ 0.16
BRCC3P46736 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms