Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CBX5P45973 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.17□□□□□ -0.3
CBX5P45973 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.17□□□□□ -0.3
CBX5P45973 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.17□□□□□ -0.3
CBX5P45973 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CBX5P45973 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.17□□□□□ -0.3
CBX5P45973 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CBX5P45973 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CBX5P45973 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CBX5P45973 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CBX5P45973 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC13.17□□□□□ -0.3
CBX5P45973 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CBX5P45973 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CBX5P45973 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CBX5P45973 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CBX5P45973 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CBX5P45973 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CBX5P45973 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
CBX5P45973 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CBX5P45973 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CBX5P45973 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.17□□□□□ -0.3
CBX5P45973 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CBX5P45973 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CBX5P45973 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CBX5P45973 HLA-H-201ENST00000383620 1096 ntBASIC13.17□□□□□ -0.3
CBX5P45973 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.17□□□□□ -0.3
CBX5P45973 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CBX5P45973 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.17□□□□□ -0.3
CBX5P45973 AL031284.1-201ENST00000419297 478 ntBASIC13.17□□□□□ -0.3
CBX5P45973 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.17□□□□□ -0.3
CBX5P45973 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.17□□□□□ -0.3
CBX5P45973 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.17□□□□□ -0.3
CBX5P45973 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.17□□□□□ -0.3
CBX5P45973 AC027307.2-201ENST00000591252 911 ntBASIC13.17□□□□□ -0.3
CBX5P45973 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.17□□□□□ -0.3
CBX5P45973 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
CBX5P45973 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CBX5P45973 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CBX5P45973 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CBX5P45973 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CBX5P45973 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CBX5P45973 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CBX5P45973 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CBX5P45973 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CBX5P45973 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.17□□□□□ -0.3
CBX5P45973 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
CBX5P45973 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CBX5P45973 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CBX5P45973 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CBX5P45973 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.17□□□□□ -0.3
CBX5P45973 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CBX5P45973 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CBX5P45973 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CBX5P45973 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
CBX5P45973 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CBX5P45973 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CBX5P45973 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CBX5P45973 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CBX5P45973 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CBX5P45973 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CBX5P45973 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.16□□□□□ -0.3
CBX5P45973 AL607033.1-201ENST00000623900 1599 ntBASIC13.16□□□□□ -0.3
CBX5P45973 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CBX5P45973 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CBX5P45973 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.16□□□□□ -0.3
CBX5P45973 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CBX5P45973 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
CBX5P45973 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC13.16□□□□□ -0.3
CBX5P45973 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.16□□□□□ -0.3
CBX5P45973 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CBX5P45973 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CBX5P45973 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CBX5P45973 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CBX5P45973 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CBX5P45973 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.16□□□□□ -0.3
CBX5P45973 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.16□□□□□ -0.3
CBX5P45973 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC13.16□□□□□ -0.3
CBX5P45973 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.16□□□□□ -0.3
CBX5P45973 EMBP1-201ENST00000458200 901 ntBASIC13.16□□□□□ -0.3
CBX5P45973 AC074386.1-202ENST00000463561 864 ntBASIC13.16□□□□□ -0.3
CBX5P45973 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.16□□□□□ -0.3
CBX5P45973 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.16□□□□□ -0.3
CBX5P45973 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CBX5P45973 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.16□□□□□ -0.3
CBX5P45973 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC13.16□□□□□ -0.3
CBX5P45973 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CBX5P45973 MIR7706-201ENST00000613747 67 ntBASIC13.16□□□□□ -0.3
CBX5P45973 AC116407.3-201ENST00000623905 1129 ntBASIC13.16□□□□□ -0.3
CBX5P45973 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.16□□□□□ -0.3
CBX5P45973 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CBX5P45973 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.16□□□□□ -0.3
CBX5P45973 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CBX5P45973 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CBX5P45973 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CBX5P45973 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.16□□□□□ -0.3
CBX5P45973 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CBX5P45973 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CBX5P45973 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CBX5P45973 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.16□□□□□ -0.3
CBX5P45973 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms