Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
USP6P35125 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC20.06■□□□□ 0.8
USP6P35125 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP6P35125 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP6P35125 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC20.06■□□□□ 0.8
USP6P35125 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP6P35125 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP6P35125 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP6P35125 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP6P35125 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
USP6P35125 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP6P35125 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP6P35125 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC20.06■□□□□ 0.8
USP6P35125 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
USP6P35125 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP6P35125 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
USP6P35125 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP6P35125 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP6P35125 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP6P35125 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP6P35125 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP6P35125 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP6P35125 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC20.05■□□□□ 0.8
USP6P35125 TSPY25P-201ENST00000429463 745 ntBASIC20.05■□□□□ 0.8
USP6P35125 AC026320.2-201ENST00000434379 478 ntBASIC20.05■□□□□ 0.8
USP6P35125 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
USP6P35125 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP6P35125 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC20.05■□□□□ 0.8
USP6P35125 AC005632.3-201ENST00000605544 308 ntBASIC20.05■□□□□ 0.8
USP6P35125 MIR6842-201ENST00000612539 65 ntBASIC20.05■□□□□ 0.8
USP6P35125 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
USP6P35125 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
USP6P35125 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC20.05■□□□□ 0.8
USP6P35125 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP6P35125 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC20.05■□□□□ 0.8
USP6P35125 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP6P35125 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC20.05■□□□□ 0.8
USP6P35125 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP6P35125 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP6P35125 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
USP6P35125 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP6P35125 F10-203ENST00000409306 1450 ntTSL 3 BASIC20.05■□□□□ 0.8
USP6P35125 R3HDM2P2-201ENST00000401880 2116 ntBASIC20.05■□□□□ 0.8
USP6P35125 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP6P35125 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC20.04■□□□□ 0.8
USP6P35125 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP6P35125 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP6P35125 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP6P35125 MBP-201ENST00000354542 575 ntTSL 2 BASIC20.04■□□□□ 0.8
USP6P35125 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
USP6P35125 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC20.04■□□□□ 0.8
USP6P35125 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC20.04■□□□□ 0.8
USP6P35125 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC20.04■□□□□ 0.8
USP6P35125 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP6P35125 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP6P35125 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC20.04■□□□□ 0.8
USP6P35125 WT1-AS_6.1-201ENST00000614919 121 ntBASIC20.04■□□□□ 0.8
USP6P35125 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP6P35125 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP6P35125 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP6P35125 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP6P35125 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP6P35125 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP6P35125 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP6P35125 KRT8P31-201ENST00000504812 1408 ntBASIC20.04■□□□□ 0.8
USP6P35125 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC20.04■□□□□ 0.8
USP6P35125 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC20.04■□□□□ 0.8
USP6P35125 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP6P35125 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP6P35125 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC20.03■□□□□ 0.8
USP6P35125 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP6P35125 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC20.03■□□□□ 0.8
USP6P35125 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP6P35125 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC20.03■□□□□ 0.8
USP6P35125 DNAJB1P1-201ENST00000429417 1024 ntBASIC20.03■□□□□ 0.8
USP6P35125 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP6P35125 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC20.03■□□□□ 0.8
USP6P35125 AC008723.1-201ENST00000506922 207 ntBASIC20.03■□□□□ 0.8
USP6P35125 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC20.03■□□□□ 0.8
USP6P35125 MIR4750-201ENST00000584564 56 ntBASIC20.03■□□□□ 0.8
USP6P35125 RPL17P45-201ENST00000586289 509 ntBASIC20.03■□□□□ 0.8
USP6P35125 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC20.03■□□□□ 0.8
USP6P35125 AC103810.10-201ENST00000606504 343 ntBASIC20.03■□□□□ 0.8
USP6P35125 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC20.03■□□□□ 0.8
USP6P35125 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP6P35125 MIR6769A-201ENST00000617340 73 ntBASIC20.03■□□□□ 0.8
USP6P35125 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP6P35125 CMC2-224ENST00000630396 481 ntTSL 5 BASIC20.03■□□□□ 0.8
USP6P35125 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP6P35125 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP6P35125 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP6P35125 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP6P35125 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC20.03■□□□□ 0.8
USP6P35125 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC20.03■□□□□ 0.8
USP6P35125 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
USP6P35125 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP6P35125 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP6P35125 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP6P35125 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC20.03■□□□□ 0.8
USP6P35125 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms