Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RXRBP28702 ZBED1P1-201ENST00000502364 1930 ntBASIC19.28■□□□□ 0.68
RXRBP28702 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RXRBP28702 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RXRBP28702 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
RXRBP28702 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RXRBP28702 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RXRBP28702 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RXRBP28702 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC19.28■□□□□ 0.68
RXRBP28702 MACROD2-204ENST00000407045 727 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RXRBP28702 AL137244.1-201ENST00000422931 865 ntBASIC19.28■□□□□ 0.68
RXRBP28702 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RXRBP28702 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC19.28■□□□□ 0.68
RXRBP28702 NRADDP-201ENST00000437305 691 ntBASIC19.28■□□□□ 0.68
RXRBP28702 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
RXRBP28702 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RXRBP28702 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC19.28■□□□□ 0.68
RXRBP28702 TPT1P6-201ENST00000458298 514 ntBASIC19.28■□□□□ 0.68
RXRBP28702 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RXRBP28702 ACTBP9-201ENST00000587663 1099 ntBASIC19.28■□□□□ 0.68
RXRBP28702 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC19.28■□□□□ 0.68
RXRBP28702 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RXRBP28702 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC19.28■□□□□ 0.68
RXRBP28702 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RXRBP28702 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC19.28■□□□□ 0.68
RXRBP28702 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RXRBP28702 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RXRBP28702 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RXRBP28702 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.28■□□□□ 0.68
RXRBP28702 AC003102.2-201ENST00000589195 1469 ntBASIC19.28■□□□□ 0.68
RXRBP28702 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RXRBP28702 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RXRBP28702 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RXRBP28702 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RXRBP28702 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RXRBP28702 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RXRBP28702 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
RXRBP28702 AL390961.4-201ENST00000623958 2535 ntBASIC19.27■□□□□ 0.68
RXRBP28702 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RXRBP28702 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
RXRBP28702 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
RXRBP28702 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
RXRBP28702 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RXRBP28702 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.27■□□□□ 0.68
RXRBP28702 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RXRBP28702 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RXRBP28702 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC19.27■□□□□ 0.68
RXRBP28702 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RXRBP28702 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RXRBP28702 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
RXRBP28702 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RXRBP28702 HNRNPA1P27-201ENST00000412087 955 ntBASIC19.27■□□□□ 0.68
RXRBP28702 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC19.27■□□□□ 0.68
RXRBP28702 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC19.27■□□□□ 0.68
RXRBP28702 AC136604.1-202ENST00000425471 771 ntBASIC19.27■□□□□ 0.68
RXRBP28702 IFNWP2-201ENST00000431203 580 ntBASIC19.27■□□□□ 0.68
RXRBP28702 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC19.27■□□□□ 0.68
RXRBP28702 GOLGA6L16P-201ENST00000441780 1299 ntBASIC19.27■□□□□ 0.68
RXRBP28702 RN7SL564P-201ENST00000496309 250 ntBASIC19.27■□□□□ 0.68
RXRBP28702 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC19.27■□□□□ 0.68
RXRBP28702 LY6E-215ENST00000523847 427 ntTSL 3 BASIC19.27■□□□□ 0.68
RXRBP28702 AC120498.7-201ENST00000562876 330 ntBASIC19.27■□□□□ 0.68
RXRBP28702 AC091304.3-201ENST00000566500 716 ntBASIC19.27■□□□□ 0.68
RXRBP28702 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC19.27■□□□□ 0.68
RXRBP28702 COX5A-205ENST00000568517 582 ntTSL 3 BASIC19.27■□□□□ 0.68
RXRBP28702 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RXRBP28702 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
RXRBP28702 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RXRBP28702 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
RXRBP28702 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RXRBP28702 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
RXRBP28702 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RXRBP28702 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RXRBP28702 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RXRBP28702 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RXRBP28702 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RXRBP28702 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RXRBP28702 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RXRBP28702 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RXRBP28702 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.26■□□□□ 0.67
RXRBP28702 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
RXRBP28702 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
RXRBP28702 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RXRBP28702 AC007292.2-201ENST00000593524 1812 ntBASIC19.26■□□□□ 0.67
RXRBP28702 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RXRBP28702 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
RXRBP28702 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RXRBP28702 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
RXRBP28702 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RXRBP28702 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RXRBP28702 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC19.26■□□□□ 0.67
RXRBP28702 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RXRBP28702 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC19.26■□□□□ 0.67
RXRBP28702 HNRNPA1P25-201ENST00000422644 937 ntBASIC19.26■□□□□ 0.67
RXRBP28702 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC19.26■□□□□ 0.67
RXRBP28702 RN7SL277P-201ENST00000481521 288 ntBASIC19.26■□□□□ 0.67
RXRBP28702 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC19.26■□□□□ 0.67
RXRBP28702 AC011431.1-201ENST00000512971 230 ntBASIC19.26■□□□□ 0.67
RXRBP28702 IGHV1-12-201ENST00000518307 205 ntBASIC19.26■□□□□ 0.67
RXRBP28702 KRT18P37-201ENST00000520711 1282 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms