Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COL8A2P25067 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COL8A2P25067 AC091951.1-201ENST00000512854 2465 ntBASIC12.82□□□□□ -0.36
COL8A2P25067 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
COL8A2P25067 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COL8A2P25067 AL157414.3-201ENST00000624276 1954 ntBASIC12.82□□□□□ -0.36
COL8A2P25067 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COL8A2P25067 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COL8A2P25067 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
COL8A2P25067 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COL8A2P25067 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COL8A2P25067 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
COL8A2P25067 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COL8A2P25067 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COL8A2P25067 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.82□□□□□ -0.36
COL8A2P25067 AC104457.1-201ENST00000401024 814 ntBASIC12.82□□□□□ -0.36
COL8A2P25067 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC12.82□□□□□ -0.36
COL8A2P25067 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
COL8A2P25067 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC12.82□□□□□ -0.36
COL8A2P25067 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC12.82□□□□□ -0.36
COL8A2P25067 RPL13AP20-201ENST00000459725 609 ntBASIC12.82□□□□□ -0.36
COL8A2P25067 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
COL8A2P25067 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC12.82□□□□□ -0.36
COL8A2P25067 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC12.82□□□□□ -0.36
COL8A2P25067 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.82□□□□□ -0.36
COL8A2P25067 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC12.82□□□□□ -0.36
COL8A2P25067 USB1-203ENST00000539737 1212 ntTSL 2 BASIC12.82□□□□□ -0.36
COL8A2P25067 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC12.82□□□□□ -0.36
COL8A2P25067 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.82□□□□□ -0.36
COL8A2P25067 DUX4L45-201ENST00000566406 1057 ntBASIC12.82□□□□□ -0.36
COL8A2P25067 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC12.82□□□□□ -0.36
COL8A2P25067 RN7SL560P-201ENST00000577943 264 ntBASIC12.82□□□□□ -0.36
COL8A2P25067 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
COL8A2P25067 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC12.82□□□□□ -0.36
COL8A2P25067 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC12.82□□□□□ -0.36
COL8A2P25067 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC12.82□□□□□ -0.36
COL8A2P25067 ENPP7P14-201ENST00000621765 1040 ntBASIC12.82□□□□□ -0.36
COL8A2P25067 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC12.82□□□□□ -0.36
COL8A2P25067 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.82□□□□□ -0.36
COL8A2P25067 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
COL8A2P25067 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COL8A2P25067 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
COL8A2P25067 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COL8A2P25067 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
COL8A2P25067 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.82□□□□□ -0.36
COL8A2P25067 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COL8A2P25067 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COL8A2P25067 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COL8A2P25067 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COL8A2P25067 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COL8A2P25067 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COL8A2P25067 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.82□□□□□ -0.36
COL8A2P25067 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
COL8A2P25067 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC12.82□□□□□ -0.36
COL8A2P25067 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COL8A2P25067 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COL8A2P25067 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.82□□□□□ -0.36
COL8A2P25067 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
COL8A2P25067 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COL8A2P25067 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COL8A2P25067 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
COL8A2P25067 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
COL8A2P25067 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
COL8A2P25067 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
COL8A2P25067 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COL8A2P25067 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
COL8A2P25067 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COL8A2P25067 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12.81□□□□□ -0.36
COL8A2P25067 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
COL8A2P25067 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
COL8A2P25067 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
COL8A2P25067 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COL8A2P25067 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.81□□□□□ -0.36
COL8A2P25067 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
COL8A2P25067 SSR4P1-203ENST00000599569 2260 ntBASIC12.81□□□□□ -0.36
COL8A2P25067 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COL8A2P25067 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
COL8A2P25067 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
COL8A2P25067 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
COL8A2P25067 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.81□□□□□ -0.36
COL8A2P25067 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.81□□□□□ -0.36
COL8A2P25067 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12.81□□□□□ -0.36
COL8A2P25067 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
COL8A2P25067 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.81□□□□□ -0.36
COL8A2P25067 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.81□□□□□ -0.36
COL8A2P25067 CD8B2-202ENST00000417670 633 ntBASIC12.81□□□□□ -0.36
COL8A2P25067 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC12.81□□□□□ -0.36
COL8A2P25067 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
COL8A2P25067 PACS1-203ENST00000524815 628 ntTSL 4 BASIC12.81□□□□□ -0.36
COL8A2P25067 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC12.81□□□□□ -0.36
COL8A2P25067 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC12.81□□□□□ -0.36
COL8A2P25067 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC12.81□□□□□ -0.36
COL8A2P25067 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC12.81□□□□□ -0.36
COL8A2P25067 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
COL8A2P25067 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
COL8A2P25067 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COL8A2P25067 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
COL8A2P25067 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.81□□□□□ -0.36
COL8A2P25067 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COL8A2P25067 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms