Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRAFP15056 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRAFP15056 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRAFP15056 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRAFP15056 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.69■□□□□ 0.1
BRAFP15056 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BRAFP15056 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.69■□□□□ 0.1
BRAFP15056 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.69■□□□□ 0.1
BRAFP15056 HIST3H2BA-201ENST00000436555 524 ntBASIC15.69■□□□□ 0.1
BRAFP15056 AC002472.2-201ENST00000442739 958 ntBASIC15.69■□□□□ 0.1
BRAFP15056 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BRAFP15056 HNRNPUP1-201ENST00000554987 333 ntBASIC15.69■□□□□ 0.1
BRAFP15056 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.69■□□□□ 0.1
BRAFP15056 AC008738.7-201ENST00000609744 511 ntBASIC15.69■□□□□ 0.1
BRAFP15056 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRAFP15056 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRAFP15056 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.69■□□□□ 0.1
BRAFP15056 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.69■□□□□ 0.1
BRAFP15056 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.69■□□□□ 0.1
BRAFP15056 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRAFP15056 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BRAFP15056 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRAFP15056 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
BRAFP15056 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
BRAFP15056 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRAFP15056 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRAFP15056 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
BRAFP15056 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRAFP15056 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BRAFP15056 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRAFP15056 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRAFP15056 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BRAFP15056 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRAFP15056 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRAFP15056 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
BRAFP15056 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BRAFP15056 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.68■□□□□ 0.1
BRAFP15056 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.68■□□□□ 0.1
BRAFP15056 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.68■□□□□ 0.1
BRAFP15056 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.68■□□□□ 0.1
BRAFP15056 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRAFP15056 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.68■□□□□ 0.1
BRAFP15056 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.68■□□□□ 0.1
BRAFP15056 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.68■□□□□ 0.1
BRAFP15056 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.68■□□□□ 0.1
BRAFP15056 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.68■□□□□ 0.1
BRAFP15056 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.68■□□□□ 0.1
BRAFP15056 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.68■□□□□ 0.1
BRAFP15056 AL033527.5-202ENST00000641632 1098 ntBASIC15.68■□□□□ 0.1
BRAFP15056 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRAFP15056 AC079781.5-202ENST00000641784 3743 ntBASIC15.68■□□□□ 0.1
BRAFP15056 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
BRAFP15056 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.68■□□□□ 0.1
BRAFP15056 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRAFP15056 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRAFP15056 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.68■□□□□ 0.1
BRAFP15056 BEND3P1-201ENST00000421591 1944 ntBASIC15.68■□□□□ 0.1
BRAFP15056 AC113367.3-201ENST00000508316 1912 ntBASIC15.68■□□□□ 0.1
BRAFP15056 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.68■□□□□ 0.1
BRAFP15056 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRAFP15056 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
BRAFP15056 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRAFP15056 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
BRAFP15056 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BRAFP15056 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BRAFP15056 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
BRAFP15056 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRAFP15056 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
BRAFP15056 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRAFP15056 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRAFP15056 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRAFP15056 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BRAFP15056 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
BRAFP15056 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.67■□□□□ 0.1
BRAFP15056 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRAFP15056 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.67■□□□□ 0.1
BRAFP15056 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
BRAFP15056 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BRAFP15056 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.67■□□□□ 0.1
BRAFP15056 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
BRAFP15056 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRAFP15056 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
BRAFP15056 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRAFP15056 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRAFP15056 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BRAFP15056 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BRAFP15056 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRAFP15056 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRAFP15056 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRAFP15056 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.67■□□□□ 0.1
BRAFP15056 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.67■□□□□ 0.1
BRAFP15056 RN7SL618P-201ENST00000477850 296 ntBASIC15.67■□□□□ 0.1
BRAFP15056 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.67■□□□□ 0.1
BRAFP15056 ZNF890P-202ENST00000530367 1156 ntBASIC15.67■□□□□ 0.1
BRAFP15056 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRAFP15056 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.67■□□□□ 0.1
BRAFP15056 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
BRAFP15056 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.67■□□□□ 0.1
BRAFP15056 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.67■□□□□ 0.1
BRAFP15056 AC004840.1-201ENST00000636359 365 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms