Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
HOXC6P09630 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.95■□□□□ 0.3
HOXC6P09630 AC092850.2-201ENST00000623821 2697 ntBASIC16.95■□□□□ 0.3
HOXC6P09630 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXC6P09630 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXC6P09630 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXC6P09630 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.95■□□□□ 0.3
HOXC6P09630 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXC6P09630 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXC6P09630 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXC6P09630 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXC6P09630 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC6P09630 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC6P09630 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.94■□□□□ 0.3
HOXC6P09630 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC6P09630 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC6P09630 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.94■□□□□ 0.3
HOXC6P09630 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC6P09630 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.94■□□□□ 0.3
HOXC6P09630 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC6P09630 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.94■□□□□ 0.3
HOXC6P09630 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.94■□□□□ 0.3
HOXC6P09630 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC6P09630 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.94■□□□□ 0.3
HOXC6P09630 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC6P09630 AC105250.1-201ENST00000509378 2057 ntBASIC16.94■□□□□ 0.3
HOXC6P09630 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
HOXC6P09630 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC6P09630 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC6P09630 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC6P09630 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC6P09630 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HOXC6P09630 RN7SL181P-201ENST00000462921 277 ntBASIC16.94■□□□□ 0.3
HOXC6P09630 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC6P09630 RN7SL258P-201ENST00000478664 300 ntBASIC16.94■□□□□ 0.3
HOXC6P09630 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.94■□□□□ 0.3
HOXC6P09630 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.94■□□□□ 0.3
HOXC6P09630 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC6P09630 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC16.94■□□□□ 0.3
HOXC6P09630 MIR4750-201ENST00000584564 56 ntBASIC16.94■□□□□ 0.3
HOXC6P09630 AC009884.2-201ENST00000603110 324 ntBASIC16.94■□□□□ 0.3
HOXC6P09630 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.94■□□□□ 0.3
HOXC6P09630 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.94■□□□□ 0.3
HOXC6P09630 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC6P09630 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC6P09630 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC6P09630 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC6P09630 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HOXC6P09630 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.94■□□□□ 0.3
HOXC6P09630 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
HOXC6P09630 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC6P09630 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC6P09630 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HOXC6P09630 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.94■□□□□ 0.3
HOXC6P09630 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HOXC6P09630 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC6P09630 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HOXC6P09630 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.93■□□□□ 0.3
HOXC6P09630 PAUPAR-201ENST00000630360 2965 ntBASIC16.93■□□□□ 0.3
HOXC6P09630 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC6P09630 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
HOXC6P09630 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC6P09630 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC6P09630 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.93■□□□□ 0.3
HOXC6P09630 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC6P09630 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC6P09630 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC6P09630 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC6P09630 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC16.93■□□□□ 0.3
HOXC6P09630 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.93■□□□□ 0.3
HOXC6P09630 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
HOXC6P09630 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC16.93■□□□□ 0.3
HOXC6P09630 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC16.93■□□□□ 0.3
HOXC6P09630 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.93■□□□□ 0.3
HOXC6P09630 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC16.93■□□□□ 0.3
HOXC6P09630 AC051619.9-201ENST00000623237 597 ntBASIC16.93■□□□□ 0.3
HOXC6P09630 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC16.93■□□□□ 0.3
HOXC6P09630 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC6P09630 TBC1D3J-201ENST00000620719 1426 ntBASIC16.93■□□□□ 0.3
HOXC6P09630 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC6P09630 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HOXC6P09630 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC6P09630 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
HOXC6P09630 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.93■□□□□ 0.3
HOXC6P09630 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HOXC6P09630 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HOXC6P09630 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC6P09630 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC6P09630 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
HOXC6P09630 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC6P09630 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC6P09630 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC6P09630 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC6P09630 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC6P09630 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.92■□□□□ 0.3
HOXC6P09630 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC6P09630 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC6P09630 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC6P09630 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC16.92■□□□□ 0.3
HOXC6P09630 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms