Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CD48P09326 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CD48P09326 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CD48P09326 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.71■□□□□ 0.11
CD48P09326 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD48P09326 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD48P09326 CLUHP6-201ENST00000580789 941 ntBASIC15.71■□□□□ 0.11
CD48P09326 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.71■□□□□ 0.11
CD48P09326 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.71■□□□□ 0.11
CD48P09326 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.71■□□□□ 0.11
CD48P09326 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.71■□□□□ 0.11
CD48P09326 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.71■□□□□ 0.11
CD48P09326 AC133539.2-201ENST00000604757 467 ntBASIC15.71■□□□□ 0.11
CD48P09326 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD48P09326 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.71■□□□□ 0.11
CD48P09326 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CD48P09326 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD48P09326 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD48P09326 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.71■□□□□ 0.11
CD48P09326 AC117489.1-201ENST00000625169 3217 ntBASIC15.71■□□□□ 0.11
CD48P09326 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
CD48P09326 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CD48P09326 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
CD48P09326 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CD48P09326 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.71■□□□□ 0.1
CD48P09326 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CD48P09326 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.1
CD48P09326 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CD48P09326 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CD48P09326 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD48P09326 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD48P09326 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CD48P09326 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD48P09326 AC113367.3-201ENST00000508316 1912 ntBASIC15.7■□□□□ 0.1
CD48P09326 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CD48P09326 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD48P09326 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CD48P09326 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.7■□□□□ 0.1
CD48P09326 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CD48P09326 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD48P09326 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
CD48P09326 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CD48P09326 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CD48P09326 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD48P09326 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD48P09326 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CD48P09326 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CD48P09326 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD48P09326 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD48P09326 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CD48P09326 PIN1P1-201ENST00000412108 996 ntBASIC15.7■□□□□ 0.1
CD48P09326 KLF2P2-201ENST00000416807 1039 ntBASIC15.7■□□□□ 0.1
CD48P09326 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD48P09326 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.7■□□□□ 0.1
CD48P09326 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.7■□□□□ 0.1
CD48P09326 DUX4L47-201ENST00000566374 394 ntBASIC15.7■□□□□ 0.1
CD48P09326 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.7■□□□□ 0.1
CD48P09326 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CD48P09326 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CD48P09326 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CD48P09326 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.7■□□□□ 0.1
CD48P09326 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD48P09326 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD48P09326 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD48P09326 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
CD48P09326 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CD48P09326 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.7■□□□□ 0.1
CD48P09326 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.7■□□□□ 0.1
CD48P09326 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
CD48P09326 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD48P09326 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CD48P09326 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD48P09326 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD48P09326 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD48P09326 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD48P09326 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.7■□□□□ 0.1
CD48P09326 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.7■□□□□ 0.1
CD48P09326 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CD48P09326 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD48P09326 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CD48P09326 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
CD48P09326 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
CD48P09326 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.69■□□□□ 0.1
CD48P09326 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD48P09326 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD48P09326 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.69■□□□□ 0.1
CD48P09326 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD48P09326 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD48P09326 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CD48P09326 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD48P09326 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD48P09326 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD48P09326 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD48P09326 NUS1P3-201ENST00000423502 862 ntBASIC15.69■□□□□ 0.1
CD48P09326 EIF3FP3-201ENST00000434851 1086 ntBASIC15.69■□□□□ 0.1
CD48P09326 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.69■□□□□ 0.1
CD48P09326 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.69■□□□□ 0.1
CD48P09326 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CD48P09326 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CD48P09326 AC026434.2-201ENST00000506094 1078 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms