Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CTSDP07339 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CTSDP07339 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CTSDP07339 KRT8P22-201ENST00000562317 1415 ntBASIC12.65□□□□□ -0.38
CTSDP07339 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.65□□□□□ -0.38
CTSDP07339 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CTSDP07339 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CTSDP07339 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.65□□□□□ -0.38
CTSDP07339 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CTSDP07339 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CTSDP07339 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CTSDP07339 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CTSDP07339 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CTSDP07339 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CTSDP07339 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.65□□□□□ -0.38
CTSDP07339 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CTSDP07339 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CTSDP07339 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CTSDP07339 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
CTSDP07339 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.65□□□□□ -0.38
CTSDP07339 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
CTSDP07339 AC074338.1-201ENST00000416825 156 ntBASIC12.65□□□□□ -0.38
CTSDP07339 FAM58CP-201ENST00000435741 640 ntBASIC12.65□□□□□ -0.38
CTSDP07339 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CTSDP07339 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CTSDP07339 KRT8P48-201ENST00000515599 1220 ntBASIC12.65□□□□□ -0.38
CTSDP07339 KRT18P58-201ENST00000527480 1120 ntBASIC12.65□□□□□ -0.38
CTSDP07339 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.65□□□□□ -0.38
CTSDP07339 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CTSDP07339 BANF1P1-201ENST00000553684 263 ntBASIC12.65□□□□□ -0.38
CTSDP07339 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CTSDP07339 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.65□□□□□ -0.38
CTSDP07339 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.65□□□□□ -0.38
CTSDP07339 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.65□□□□□ -0.38
CTSDP07339 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.65□□□□□ -0.38
CTSDP07339 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CTSDP07339 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.65□□□□□ -0.38
CTSDP07339 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.65□□□□□ -0.38
CTSDP07339 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CTSDP07339 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.65□□□□□ -0.38
CTSDP07339 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CTSDP07339 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CTSDP07339 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.65□□□□□ -0.38
CTSDP07339 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.65□□□□□ -0.38
CTSDP07339 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CTSDP07339 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CTSDP07339 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CTSDP07339 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
CTSDP07339 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
CTSDP07339 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
CTSDP07339 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CTSDP07339 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CTSDP07339 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CTSDP07339 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CTSDP07339 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CTSDP07339 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
CTSDP07339 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CTSDP07339 AC079781.5-202ENST00000641784 3743 ntBASIC12.64□□□□□ -0.39
CTSDP07339 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CTSDP07339 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CTSDP07339 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CTSDP07339 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CTSDP07339 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CTSDP07339 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CTSDP07339 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CTSDP07339 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CTSDP07339 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CTSDP07339 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.64□□□□□ -0.39
CTSDP07339 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CTSDP07339 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.64□□□□□ -0.39
CTSDP07339 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CTSDP07339 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.64□□□□□ -0.39
CTSDP07339 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CTSDP07339 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CTSDP07339 RPS19-201ENST00000221975 500 ntTSL 3 BASIC12.64□□□□□ -0.39
CTSDP07339 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CTSDP07339 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.64□□□□□ -0.39
CTSDP07339 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CTSDP07339 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CTSDP07339 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
CTSDP07339 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CTSDP07339 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CTSDP07339 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CTSDP07339 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC12.64□□□□□ -0.39
CTSDP07339 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.64□□□□□ -0.39
CTSDP07339 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
CTSDP07339 AC055717.3-201ENST00000622967 595 ntBASIC12.64□□□□□ -0.39
CTSDP07339 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CTSDP07339 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CTSDP07339 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.64□□□□□ -0.39
CTSDP07339 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CTSDP07339 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.64□□□□□ -0.39
CTSDP07339 KRT8P12-202ENST00000472924 1397 ntBASIC12.64□□□□□ -0.39
CTSDP07339 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.64□□□□□ -0.39
CTSDP07339 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CTSDP07339 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CTSDP07339 PTENP1-202ENST00000532280 3996 ntBASIC12.64□□□□□ -0.39
CTSDP07339 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CTSDP07339 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CTSDP07339 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms