Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 ST13P19-201ENST00000442505 1124 ntBASIC19.41■□□□□ 0.7
COL5A2P05997 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC19.41■□□□□ 0.7
COL5A2P05997 RPS23-204ENST00000507980 836 ntTSL 2 BASIC19.41■□□□□ 0.7
COL5A2P05997 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL5A2P05997 KRT8P1-201ENST00000557533 1207 ntBASIC19.41■□□□□ 0.7
COL5A2P05997 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC19.41■□□□□ 0.7
COL5A2P05997 MIR4472-1-201ENST00000584349 80 ntBASIC19.41■□□□□ 0.7
COL5A2P05997 HKR1-225ENST00000592168 566 ntTSL 4 BASIC19.41■□□□□ 0.7
COL5A2P05997 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC19.41■□□□□ 0.7
COL5A2P05997 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC19.41■□□□□ 0.7
COL5A2P05997 AC011247.3-201ENST00000603297 438 ntBASIC19.41■□□□□ 0.7
COL5A2P05997 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL5A2P05997 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL5A2P05997 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC19.4■□□□□ 0.7
COL5A2P05997 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.4■□□□□ 0.7
COL5A2P05997 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL5A2P05997 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
COL5A2P05997 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL5A2P05997 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL5A2P05997 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL5A2P05997 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC19.4■□□□□ 0.7
COL5A2P05997 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC19.4■□□□□ 0.7
COL5A2P05997 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL5A2P05997 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL5A2P05997 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
COL5A2P05997 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC19.4■□□□□ 0.7
COL5A2P05997 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL5A2P05997 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.4■□□□□ 0.7
COL5A2P05997 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL5A2P05997 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL5A2P05997 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL5A2P05997 AP000322.3-201ENST00000608665 388 ntBASIC19.4■□□□□ 0.7
COL5A2P05997 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.4■□□□□ 0.7
COL5A2P05997 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.4■□□□□ 0.7
COL5A2P05997 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL5A2P05997 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
COL5A2P05997 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
COL5A2P05997 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL5A2P05997 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.39■□□□□ 0.69
COL5A2P05997 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC19.39■□□□□ 0.69
COL5A2P05997 AC023024.2-201ENST00000623561 1993 ntBASIC19.39■□□□□ 0.69
COL5A2P05997 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL5A2P05997 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC19.39■□□□□ 0.69
COL5A2P05997 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL5A2P05997 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL5A2P05997 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC19.39■□□□□ 0.69
COL5A2P05997 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL5A2P05997 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL5A2P05997 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
COL5A2P05997 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL5A2P05997 HCG27-204ENST00000424675 895 ntTSL 3 BASIC19.39■□□□□ 0.69
COL5A2P05997 GCSHP3-201ENST00000431120 391 ntBASIC19.39■□□□□ 0.69
COL5A2P05997 ERP29P1-201ENST00000442902 706 ntBASIC19.39■□□□□ 0.69
COL5A2P05997 CD164-210ENST00000512821 964 ntTSL 2 BASIC19.39■□□□□ 0.69
COL5A2P05997 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC19.39■□□□□ 0.69
COL5A2P05997 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC19.39■□□□□ 0.69
COL5A2P05997 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC19.39■□□□□ 0.69
COL5A2P05997 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC19.39■□□□□ 0.69
COL5A2P05997 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL5A2P05997 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.39■□□□□ 0.69
COL5A2P05997 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.39■□□□□ 0.69
COL5A2P05997 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL5A2P05997 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL5A2P05997 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL5A2P05997 AC112693.3-201ENST00000624819 1983 ntBASIC19.39■□□□□ 0.69
COL5A2P05997 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
COL5A2P05997 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL5A2P05997 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC19.38■□□□□ 0.69
COL5A2P05997 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL5A2P05997 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL5A2P05997 BCL2-203ENST00000589955 5011 ntBASIC19.38■□□□□ 0.69
COL5A2P05997 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
COL5A2P05997 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL5A2P05997 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL5A2P05997 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC19.38■□□□□ 0.69
COL5A2P05997 FAU-202ENST00000434372 533 ntTSL 2 BASIC19.38■□□□□ 0.69
COL5A2P05997 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC19.38■□□□□ 0.69
COL5A2P05997 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
COL5A2P05997 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC19.38■□□□□ 0.69
COL5A2P05997 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC19.38■□□□□ 0.69
COL5A2P05997 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC19.38■□□□□ 0.69
COL5A2P05997 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC19.38■□□□□ 0.69
COL5A2P05997 AC012073.1-201ENST00000606114 1108 ntBASIC19.38■□□□□ 0.69
COL5A2P05997 AC002044.2-201ENST00000624910 970 ntBASIC19.38■□□□□ 0.69
COL5A2P05997 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL5A2P05997 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL5A2P05997 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL5A2P05997 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.38■□□□□ 0.69
COL5A2P05997 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
COL5A2P05997 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
COL5A2P05997 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC19.38■□□□□ 0.69
COL5A2P05997 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
COL5A2P05997 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC19.38■□□□□ 0.69
COL5A2P05997 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL5A2P05997 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL5A2P05997 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL5A2P05997 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL5A2P05997 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL5A2P05997 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL5A2P05997 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms