Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.39□□□□□ -0.11
MT-ND1P03886 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MT-ND1P03886 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
MT-ND1P03886 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MT-ND1P03886 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
MT-ND1P03886 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MT-ND1P03886 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.39□□□□□ -0.11
MT-ND1P03886 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MT-ND1P03886 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.39□□□□□ -0.11
MT-ND1P03886 AC005237.2-201ENST00000434368 219 ntBASIC14.39□□□□□ -0.11
MT-ND1P03886 DNAJB3-201ENST00000446806 729 ntBASIC14.39□□□□□ -0.11
MT-ND1P03886 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.39□□□□□ -0.11
MT-ND1P03886 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.39□□□□□ -0.11
MT-ND1P03886 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.39□□□□□ -0.11
MT-ND1P03886 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
MT-ND1P03886 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MT-ND1P03886 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.39□□□□□ -0.11
MT-ND1P03886 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.39□□□□□ -0.11
MT-ND1P03886 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.39□□□□□ -0.11
MT-ND1P03886 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.39□□□□□ -0.11
MT-ND1P03886 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MT-ND1P03886 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MT-ND1P03886 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MT-ND1P03886 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MT-ND1P03886 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MT-ND1P03886 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.39□□□□□ -0.11
MT-ND1P03886 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MT-ND1P03886 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MT-ND1P03886 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MT-ND1P03886 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MT-ND1P03886 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MT-ND1P03886 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.39□□□□□ -0.11
MT-ND1P03886 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.39□□□□□ -0.11
MT-ND1P03886 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.39□□□□□ -0.11
MT-ND1P03886 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MT-ND1P03886 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MT-ND1P03886 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MT-ND1P03886 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
MT-ND1P03886 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MT-ND1P03886 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.38□□□□□ -0.11
MT-ND1P03886 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.38□□□□□ -0.11
MT-ND1P03886 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MT-ND1P03886 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MT-ND1P03886 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.38□□□□□ -0.11
MT-ND1P03886 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.38□□□□□ -0.11
MT-ND1P03886 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
MT-ND1P03886 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
MT-ND1P03886 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MT-ND1P03886 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MT-ND1P03886 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.38□□□□□ -0.11
MT-ND1P03886 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MT-ND1P03886 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MT-ND1P03886 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
MT-ND1P03886 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.38□□□□□ -0.11
MT-ND1P03886 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.38□□□□□ -0.11
MT-ND1P03886 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
MT-ND1P03886 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.38□□□□□ -0.11
MT-ND1P03886 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.38□□□□□ -0.11
MT-ND1P03886 AL353705.2-201ENST00000428243 662 ntBASIC14.38□□□□□ -0.11
MT-ND1P03886 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.38□□□□□ -0.11
MT-ND1P03886 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.38□□□□□ -0.11
MT-ND1P03886 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MT-ND1P03886 ALG1L8P-201ENST00000533887 760 ntBASIC14.38□□□□□ -0.11
MT-ND1P03886 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.38□□□□□ -0.11
MT-ND1P03886 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.38□□□□□ -0.11
MT-ND1P03886 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
MT-ND1P03886 AL671883.3-201ENST00000603274 991 ntBASIC14.38□□□□□ -0.11
MT-ND1P03886 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.38□□□□□ -0.11
MT-ND1P03886 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
MT-ND1P03886 CICP8-201ENST00000455800 2813 ntBASIC14.38□□□□□ -0.11
MT-ND1P03886 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
MT-ND1P03886 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
MT-ND1P03886 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
MT-ND1P03886 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.38□□□□□ -0.11
MT-ND1P03886 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.38□□□□□ -0.11
MT-ND1P03886 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.38□□□□□ -0.11
MT-ND1P03886 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
MT-ND1P03886 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MT-ND1P03886 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.38□□□□□ -0.11
MT-ND1P03886 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MT-ND1P03886 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MT-ND1P03886 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MT-ND1P03886 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.38□□□□□ -0.11
MT-ND1P03886 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MT-ND1P03886 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
MT-ND1P03886 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MT-ND1P03886 AC138969.3-201ENST00000546612 1459 ntBASIC14.38□□□□□ -0.11
MT-ND1P03886 AC138932.2-201ENST00000548268 1459 ntBASIC14.38□□□□□ -0.11
MT-ND1P03886 AC126755.4-201ENST00000549796 1459 ntBASIC14.38□□□□□ -0.11
MT-ND1P03886 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MT-ND1P03886 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.37□□□□□ -0.11
MT-ND1P03886 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MT-ND1P03886 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MT-ND1P03886 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MT-ND1P03886 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.37□□□□□ -0.11
MT-ND1P03886 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MT-ND1P03886 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MT-ND1P03886 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MT-ND1P03886 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MT-ND1P03886 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms