Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
KRT6AP02538 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
KRT6AP02538 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
KRT6AP02538 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.77□□□□□ -0.04
KRT6AP02538 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
KRT6AP02538 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
KRT6AP02538 LILRP1-201ENST00000444199 1370 ntBASIC14.77□□□□□ -0.04
KRT6AP02538 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.77□□□□□ -0.04
KRT6AP02538 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.77□□□□□ -0.04
KRT6AP02538 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.77□□□□□ -0.04
KRT6AP02538 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
KRT6AP02538 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.77□□□□□ -0.04
KRT6AP02538 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
KRT6AP02538 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
KRT6AP02538 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
KRT6AP02538 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.77□□□□□ -0.05
KRT6AP02538 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.77□□□□□ -0.05
KRT6AP02538 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.77□□□□□ -0.05
KRT6AP02538 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
KRT6AP02538 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.77□□□□□ -0.05
KRT6AP02538 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.77□□□□□ -0.05
KRT6AP02538 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
KRT6AP02538 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.77□□□□□ -0.05
KRT6AP02538 AC135586.1-201ENST00000539323 574 ntBASIC14.77□□□□□ -0.05
KRT6AP02538 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.77□□□□□ -0.05
KRT6AP02538 AL390754.1-201ENST00000619088 582 ntBASIC14.77□□□□□ -0.05
KRT6AP02538 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.77□□□□□ -0.05
KRT6AP02538 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
KRT6AP02538 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
KRT6AP02538 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
KRT6AP02538 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
KRT6AP02538 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.77□□□□□ -0.05
KRT6AP02538 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
KRT6AP02538 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
KRT6AP02538 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
KRT6AP02538 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
KRT6AP02538 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
KRT6AP02538 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
KRT6AP02538 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.77□□□□□ -0.05
KRT6AP02538 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
KRT6AP02538 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
KRT6AP02538 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.76□□□□□ -0.05
KRT6AP02538 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.76□□□□□ -0.05
KRT6AP02538 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6AP02538 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6AP02538 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6AP02538 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6AP02538 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
KRT6AP02538 AL360270.3-201ENST00000609118 1348 ntBASIC14.76□□□□□ -0.05
KRT6AP02538 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6AP02538 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6AP02538 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.76□□□□□ -0.05
KRT6AP02538 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6AP02538 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
KRT6AP02538 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.76□□□□□ -0.05
KRT6AP02538 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6AP02538 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6AP02538 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.76□□□□□ -0.05
KRT6AP02538 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
KRT6AP02538 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.76□□□□□ -0.05
KRT6AP02538 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6AP02538 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.76□□□□□ -0.05
KRT6AP02538 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6AP02538 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
KRT6AP02538 AC009407.1-201ENST00000568958 598 ntBASIC14.76□□□□□ -0.05
KRT6AP02538 AC036164.1-201ENST00000570544 333 ntBASIC14.76□□□□□ -0.05
KRT6AP02538 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.76□□□□□ -0.05
KRT6AP02538 SRD5A3P1-201ENST00000603021 949 ntBASIC14.76□□□□□ -0.05
KRT6AP02538 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6AP02538 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
KRT6AP02538 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.76□□□□□ -0.05
KRT6AP02538 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
KRT6AP02538 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6AP02538 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6AP02538 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6AP02538 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6AP02538 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6AP02538 SNX18-202ENST00000343017 3140 ntBASIC14.76□□□□□ -0.05
KRT6AP02538 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6AP02538 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
KRT6AP02538 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.76□□□□□ -0.05
KRT6AP02538 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6AP02538 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6AP02538 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6AP02538 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.76□□□□□ -0.05
KRT6AP02538 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
KRT6AP02538 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.75□□□□□ -0.05
KRT6AP02538 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6AP02538 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
KRT6AP02538 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6AP02538 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6AP02538 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.75□□□□□ -0.05
KRT6AP02538 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.75□□□□□ -0.05
KRT6AP02538 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6AP02538 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6AP02538 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6AP02538 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.75□□□□□ -0.05
KRT6AP02538 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.75□□□□□ -0.05
KRT6AP02538 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.75□□□□□ -0.05
KRT6AP02538 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms