Protein–RNA interactions for Protein: O95347

SMC2, Structural maintenance of chromosomes protein 2, humanhuman

Predictions only

Length 1,197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2O95347 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMC2O95347 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMC2O95347 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SMC2O95347 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC17.23■□□□□ 0.35
SMC2O95347 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMC2O95347 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMC2O95347 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMC2O95347 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SMC2O95347 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.23■□□□□ 0.35
SMC2O95347 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMC2O95347 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMC2O95347 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.23■□□□□ 0.35
SMC2O95347 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.23■□□□□ 0.35
SMC2O95347 AC069120.2-201ENST00000524091 540 ntBASIC17.23■□□□□ 0.35
SMC2O95347 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.23■□□□□ 0.35
SMC2O95347 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.23■□□□□ 0.35
SMC2O95347 AC025678.2-201ENST00000562061 970 ntBASIC17.23■□□□□ 0.35
SMC2O95347 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMC2O95347 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.23■□□□□ 0.35
SMC2O95347 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.23■□□□□ 0.35
SMC2O95347 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.23■□□□□ 0.35
SMC2O95347 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
SMC2O95347 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SMC2O95347 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
SMC2O95347 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMC2O95347 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
SMC2O95347 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SMC2O95347 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
SMC2O95347 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SMC2O95347 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMC2O95347 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMC2O95347 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMC2O95347 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC17.23■□□□□ 0.35
SMC2O95347 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMC2O95347 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMC2O95347 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMC2O95347 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMC2O95347 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMC2O95347 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SMC2O95347 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC17.22■□□□□ 0.35
SMC2O95347 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMC2O95347 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMC2O95347 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.22■□□□□ 0.35
SMC2O95347 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMC2O95347 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMC2O95347 AC097359.2-201ENST00000604992 2389 ntBASIC17.22■□□□□ 0.35
SMC2O95347 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SMC2O95347 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMC2O95347 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
SMC2O95347 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMC2O95347 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMC2O95347 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMC2O95347 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMC2O95347 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMC2O95347 KLF2P3-201ENST00000451977 1087 ntBASIC17.22■□□□□ 0.35
SMC2O95347 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.22■□□□□ 0.35
SMC2O95347 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.22■□□□□ 0.35
SMC2O95347 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.22■□□□□ 0.35
SMC2O95347 AC027369.6-201ENST00000525520 931 ntBASIC17.22■□□□□ 0.35
SMC2O95347 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.22■□□□□ 0.35
SMC2O95347 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SMC2O95347 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.22■□□□□ 0.35
SMC2O95347 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMC2O95347 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
SMC2O95347 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.22■□□□□ 0.35
SMC2O95347 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.22■□□□□ 0.35
SMC2O95347 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.22■□□□□ 0.35
SMC2O95347 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMC2O95347 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMC2O95347 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMC2O95347 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMC2O95347 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMC2O95347 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
SMC2O95347 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.22■□□□□ 0.35
SMC2O95347 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMC2O95347 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMC2O95347 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC17.22■□□□□ 0.35
SMC2O95347 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMC2O95347 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SMC2O95347 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMC2O95347 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMC2O95347 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
SMC2O95347 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMC2O95347 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SMC2O95347 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMC2O95347 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMC2O95347 AC087499.5-201ENST00000452760 1342 ntBASIC17.21■□□□□ 0.35
SMC2O95347 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SMC2O95347 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMC2O95347 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMC2O95347 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.21■□□□□ 0.35
SMC2O95347 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SMC2O95347 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMC2O95347 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMC2O95347 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SMC2O95347 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.21■□□□□ 0.35
SMC2O95347 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SMC2O95347 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMC2O95347 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.21■□□□□ 0.35
SMC2O95347 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms