Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL5O76039 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CDKL5O76039 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.64■□□□□ 0.41
CDKL5O76039 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC17.64■□□□□ 0.41
CDKL5O76039 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17.64■□□□□ 0.41
CDKL5O76039 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL5O76039 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.64■□□□□ 0.41
CDKL5O76039 GSN-203ENST00000373808 2664 ntTSL 2 BASIC17.64■□□□□ 0.41
CDKL5O76039 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CDKL5O76039 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.64■□□□□ 0.41
CDKL5O76039 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.64■□□□□ 0.41
CDKL5O76039 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CDKL5O76039 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.64■□□□□ 0.41
CDKL5O76039 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL5O76039 WASH4P-201ENST00000564273 1246 ntBASIC17.64■□□□□ 0.41
CDKL5O76039 DUX4L47-201ENST00000566374 394 ntBASIC17.64■□□□□ 0.41
CDKL5O76039 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.64■□□□□ 0.41
CDKL5O76039 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.64■□□□□ 0.41
CDKL5O76039 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.64■□□□□ 0.41
CDKL5O76039 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.64■□□□□ 0.41
CDKL5O76039 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL5O76039 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL5O76039 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL5O76039 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL5O76039 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.64■□□□□ 0.41
CDKL5O76039 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL5O76039 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL5O76039 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL5O76039 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL5O76039 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.64■□□□□ 0.41
CDKL5O76039 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL5O76039 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.64■□□□□ 0.41
CDKL5O76039 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.64■□□□□ 0.41
CDKL5O76039 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL5O76039 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.64■□□□□ 0.41
CDKL5O76039 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL5O76039 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.63■□□□□ 0.41
CDKL5O76039 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.63■□□□□ 0.41
CDKL5O76039 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDKL5O76039 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.63■□□□□ 0.41
CDKL5O76039 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDKL5O76039 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC17.63■□□□□ 0.41
CDKL5O76039 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDKL5O76039 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDKL5O76039 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDKL5O76039 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CDKL5O76039 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CDKL5O76039 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDKL5O76039 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDKL5O76039 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CDKL5O76039 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDKL5O76039 GIMAP3P-201ENST00000495150 836 ntBASIC17.63■□□□□ 0.41
CDKL5O76039 AC009486.1-201ENST00000569860 813 ntBASIC17.63■□□□□ 0.41
CDKL5O76039 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.63■□□□□ 0.41
CDKL5O76039 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CDKL5O76039 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDKL5O76039 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.63■□□□□ 0.41
CDKL5O76039 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
CDKL5O76039 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.63■□□□□ 0.41
CDKL5O76039 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.63■□□□□ 0.41
CDKL5O76039 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.63■□□□□ 0.41
CDKL5O76039 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
CDKL5O76039 AC232323.1-201ENST00000540724 2099 ntBASIC17.63■□□□□ 0.41
CDKL5O76039 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CDKL5O76039 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.63■□□□□ 0.41
CDKL5O76039 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDKL5O76039 AC018665.1-201ENST00000622927 1362 ntBASIC17.63■□□□□ 0.41
CDKL5O76039 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC17.63■□□□□ 0.41
CDKL5O76039 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CDKL5O76039 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
CDKL5O76039 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
CDKL5O76039 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
CDKL5O76039 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL5O76039 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL5O76039 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL5O76039 LRRC59-203ENST00000576448 1531 ntBASIC17.62■□□□□ 0.41
CDKL5O76039 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL5O76039 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CDKL5O76039 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL5O76039 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL5O76039 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL5O76039 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL5O76039 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CDKL5O76039 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL5O76039 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC17.62■□□□□ 0.41
CDKL5O76039 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL5O76039 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CDKL5O76039 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL5O76039 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL5O76039 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL5O76039 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CDKL5O76039 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CDKL5O76039 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.62■□□□□ 0.41
CDKL5O76039 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CDKL5O76039 ACTBP8-201ENST00000403258 1108 ntBASIC17.62■□□□□ 0.41
CDKL5O76039 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL5O76039 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL5O76039 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.62■□□□□ 0.41
CDKL5O76039 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.62■□□□□ 0.41
CDKL5O76039 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms