Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH16O75309 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH16O75309 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH16O75309 AC022447.6-201ENST00000515522 438 ntBASIC15.39■□□□□ 0.05
CDH16O75309 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.39■□□□□ 0.05
CDH16O75309 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH16O75309 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.39■□□□□ 0.05
CDH16O75309 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH16O75309 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH16O75309 AL133215.2-201ENST00000609242 977 ntBASIC15.39■□□□□ 0.05
CDH16O75309 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH16O75309 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH16O75309 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH16O75309 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.39■□□□□ 0.05
CDH16O75309 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH16O75309 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CDH16O75309 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH16O75309 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH16O75309 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH16O75309 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH16O75309 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
CDH16O75309 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CDH16O75309 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH16O75309 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH16O75309 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.38■□□□□ 0.05
CDH16O75309 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH16O75309 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH16O75309 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CDH16O75309 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH16O75309 AL354702.1-201ENST00000442006 1960 ntBASIC15.38■□□□□ 0.05
CDH16O75309 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH16O75309 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CDH16O75309 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDH16O75309 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.38■□□□□ 0.05
CDH16O75309 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDH16O75309 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.38■□□□□ 0.05
CDH16O75309 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.38■□□□□ 0.05
CDH16O75309 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.38■□□□□ 0.05
CDH16O75309 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDH16O75309 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
CDH16O75309 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH16O75309 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDH16O75309 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH16O75309 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH16O75309 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH16O75309 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.38■□□□□ 0.05
CDH16O75309 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.38■□□□□ 0.05
CDH16O75309 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDH16O75309 KRT18P64-201ENST00000434946 1219 ntBASIC15.38■□□□□ 0.05
CDH16O75309 KRT18P43-201ENST00000469825 1281 ntBASIC15.38■□□□□ 0.05
CDH16O75309 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.38■□□□□ 0.05
CDH16O75309 ALG1L8P-201ENST00000533887 760 ntBASIC15.38■□□□□ 0.05
CDH16O75309 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.38■□□□□ 0.05
CDH16O75309 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
CDH16O75309 AC005829.1-201ENST00000570002 483 ntBASIC15.38■□□□□ 0.05
CDH16O75309 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.38■□□□□ 0.05
CDH16O75309 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.38■□□□□ 0.05
CDH16O75309 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.38■□□□□ 0.05
CDH16O75309 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CDH16O75309 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH16O75309 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH16O75309 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH16O75309 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH16O75309 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.38■□□□□ 0.05
CDH16O75309 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC15.38■□□□□ 0.05
CDH16O75309 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH16O75309 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
CDH16O75309 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDH16O75309 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH16O75309 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH16O75309 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.38■□□□□ 0.05
CDH16O75309 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH16O75309 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.38■□□□□ 0.05
CDH16O75309 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.38■□□□□ 0.05
CDH16O75309 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDH16O75309 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH16O75309 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDH16O75309 AC089987.1-201ENST00000551654 2209 ntBASIC15.37■□□□□ 0.05
CDH16O75309 AC018665.1-201ENST00000622927 1362 ntBASIC15.37■□□□□ 0.05
CDH16O75309 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CDH16O75309 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CDH16O75309 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CDH16O75309 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CDH16O75309 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH16O75309 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDH16O75309 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH16O75309 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.37■□□□□ 0.05
CDH16O75309 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CDH16O75309 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH16O75309 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH16O75309 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH16O75309 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.37■□□□□ 0.05
CDH16O75309 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDH16O75309 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CDH16O75309 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDH16O75309 AC015922.1-201ENST00000421102 1152 ntBASIC15.37■□□□□ 0.05
CDH16O75309 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.37■□□□□ 0.05
CDH16O75309 SAMD11P1-201ENST00000571429 661 ntBASIC15.37■□□□□ 0.05
CDH16O75309 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.37■□□□□ 0.05
CDH16O75309 RN7SL828P-201ENST00000607615 303 ntBASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms