Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.66□□□□□ -0.06
CPNE3O75131 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE3O75131 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE3O75131 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CPNE3O75131 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE3O75131 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE3O75131 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE3O75131 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE3O75131 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CPNE3O75131 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE3O75131 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE3O75131 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE3O75131 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE3O75131 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CPNE3O75131 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE3O75131 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE3O75131 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CPNE3O75131 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.66□□□□□ -0.06
CPNE3O75131 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.66□□□□□ -0.06
CPNE3O75131 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CPNE3O75131 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.66□□□□□ -0.06
CPNE3O75131 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.66□□□□□ -0.06
CPNE3O75131 CSF2RBP1-201ENST00000447905 391 ntBASIC14.66□□□□□ -0.06
CPNE3O75131 RNA5SP412-201ENST00000516234 123 ntBASIC14.66□□□□□ -0.06
CPNE3O75131 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.66□□□□□ -0.06
CPNE3O75131 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE3O75131 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.66□□□□□ -0.06
CPNE3O75131 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.66□□□□□ -0.06
CPNE3O75131 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.66□□□□□ -0.06
CPNE3O75131 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.66□□□□□ -0.06
CPNE3O75131 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE3O75131 OR2I1P-210ENST00000642037 4691 ntBASIC14.66□□□□□ -0.06
CPNE3O75131 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE3O75131 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE3O75131 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
CPNE3O75131 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CPNE3O75131 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE3O75131 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE3O75131 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.66□□□□□ -0.06
CPNE3O75131 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
CPNE3O75131 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CPNE3O75131 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.66□□□□□ -0.06
CPNE3O75131 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.66□□□□□ -0.06
CPNE3O75131 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE3O75131 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CPNE3O75131 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.66□□□□□ -0.06
CPNE3O75131 AC023908.3-201ENST00000564211 3047 ntBASIC14.66□□□□□ -0.06
CPNE3O75131 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE3O75131 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE3O75131 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE3O75131 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE3O75131 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE3O75131 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE3O75131 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE3O75131 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE3O75131 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE3O75131 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.65□□□□□ -0.06
CPNE3O75131 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.65□□□□□ -0.06
CPNE3O75131 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE3O75131 AP005117.1-202ENST00000581724 1908 ntBASIC14.65□□□□□ -0.06
CPNE3O75131 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE3O75131 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CPNE3O75131 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE3O75131 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE3O75131 STK33P1-201ENST00000423835 1218 ntBASIC14.65□□□□□ -0.06
CPNE3O75131 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CPNE3O75131 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.65□□□□□ -0.06
CPNE3O75131 AC025181.2-201ENST00000606994 802 ntBASIC14.65□□□□□ -0.06
CPNE3O75131 RHOXF1P1-202ENST00000635473 501 ntBASIC14.65□□□□□ -0.06
CPNE3O75131 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE3O75131 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CPNE3O75131 REXO1L6P-201ENST00000603433 1515 ntBASIC14.65□□□□□ -0.06
CPNE3O75131 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE3O75131 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CPNE3O75131 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.65□□□□□ -0.06
CPNE3O75131 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE3O75131 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CPNE3O75131 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE3O75131 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE3O75131 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CPNE3O75131 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE3O75131 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CPNE3O75131 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CPNE3O75131 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.64□□□□□ -0.07
CPNE3O75131 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CPNE3O75131 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CPNE3O75131 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.64□□□□□ -0.07
CPNE3O75131 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CPNE3O75131 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.64□□□□□ -0.07
CPNE3O75131 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CPNE3O75131 PCDHA3-202ENST00000532566 4594 ntBASIC14.64□□□□□ -0.07
CPNE3O75131 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CPNE3O75131 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.64□□□□□ -0.07
CPNE3O75131 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CPNE3O75131 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CPNE3O75131 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CPNE3O75131 AP003680.1-201ENST00000598970 3660 ntBASIC14.64□□□□□ -0.07
CPNE3O75131 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CPNE3O75131 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CPNE3O75131 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms