Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PRAMEF2O60811 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.29□□□□□ -0.12
PRAMEF2O60811 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.29□□□□□ -0.12
PRAMEF2O60811 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.29□□□□□ -0.12
PRAMEF2O60811 BX539320.1-201ENST00000623759 877 ntBASIC14.29□□□□□ -0.12
PRAMEF2O60811 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
PRAMEF2O60811 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PRAMEF2O60811 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.29□□□□□ -0.12
PRAMEF2O60811 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PRAMEF2O60811 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PRAMEF2O60811 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PRAMEF2O60811 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.29□□□□□ -0.12
PRAMEF2O60811 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
PRAMEF2O60811 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.29□□□□□ -0.12
PRAMEF2O60811 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PRAMEF2O60811 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.29□□□□□ -0.12
PRAMEF2O60811 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
PRAMEF2O60811 AC007787.1-201ENST00000588095 1583 ntBASIC14.29□□□□□ -0.12
PRAMEF2O60811 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PRAMEF2O60811 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PRAMEF2O60811 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PRAMEF2O60811 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PRAMEF2O60811 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PRAMEF2O60811 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PRAMEF2O60811 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
PRAMEF2O60811 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.29□□□□□ -0.12
PRAMEF2O60811 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PRAMEF2O60811 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PRAMEF2O60811 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PRAMEF2O60811 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
PRAMEF2O60811 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.29□□□□□ -0.12
PRAMEF2O60811 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
PRAMEF2O60811 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PRAMEF2O60811 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.29□□□□□ -0.12
PRAMEF2O60811 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PRAMEF2O60811 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
PRAMEF2O60811 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PRAMEF2O60811 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PRAMEF2O60811 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PRAMEF2O60811 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PRAMEF2O60811 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PRAMEF2O60811 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
PRAMEF2O60811 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
PRAMEF2O60811 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.28□□□□□ -0.12
PRAMEF2O60811 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PRAMEF2O60811 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PRAMEF2O60811 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.28□□□□□ -0.12
PRAMEF2O60811 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PRAMEF2O60811 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PRAMEF2O60811 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PRAMEF2O60811 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PRAMEF2O60811 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
PRAMEF2O60811 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.28□□□□□ -0.12
PRAMEF2O60811 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.28□□□□□ -0.12
PRAMEF2O60811 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PRAMEF2O60811 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
PRAMEF2O60811 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.28□□□□□ -0.12
PRAMEF2O60811 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PRAMEF2O60811 BNIP3P42-201ENST00000454982 569 ntBASIC14.28□□□□□ -0.12
PRAMEF2O60811 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.28□□□□□ -0.12
PRAMEF2O60811 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.28□□□□□ -0.12
PRAMEF2O60811 AC092658.1-201ENST00000505836 891 ntBASIC14.28□□□□□ -0.12
PRAMEF2O60811 AC091951.1-201ENST00000512854 2465 ntBASIC14.28□□□□□ -0.12
PRAMEF2O60811 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PRAMEF2O60811 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.28□□□□□ -0.12
PRAMEF2O60811 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.28□□□□□ -0.12
PRAMEF2O60811 BNIP3P29-201ENST00000598302 571 ntBASIC14.28□□□□□ -0.12
PRAMEF2O60811 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
PRAMEF2O60811 AC011447.5-201ENST00000616168 564 ntBASIC14.28□□□□□ -0.12
PRAMEF2O60811 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PRAMEF2O60811 AL033527.4-201ENST00000641026 673 ntBASIC14.28□□□□□ -0.12
PRAMEF2O60811 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PRAMEF2O60811 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PRAMEF2O60811 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PRAMEF2O60811 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
PRAMEF2O60811 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PRAMEF2O60811 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PRAMEF2O60811 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PRAMEF2O60811 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.28□□□□□ -0.12
PRAMEF2O60811 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.28□□□□□ -0.12
PRAMEF2O60811 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PRAMEF2O60811 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.27□□□□□ -0.12
PRAMEF2O60811 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.27□□□□□ -0.12
PRAMEF2O60811 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PRAMEF2O60811 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PRAMEF2O60811 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
PRAMEF2O60811 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PRAMEF2O60811 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PRAMEF2O60811 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PRAMEF2O60811 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
PRAMEF2O60811 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.12
PRAMEF2O60811 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PRAMEF2O60811 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PRAMEF2O60811 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PRAMEF2O60811 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PRAMEF2O60811 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PRAMEF2O60811 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
PRAMEF2O60811 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PRAMEF2O60811 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
PRAMEF2O60811 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms