Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CTNND1O60716 AC090616.6-203ENST00000579186 1945 ntBASIC17.61■□□□□ 0.41
CTNND1O60716 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.61■□□□□ 0.41
CTNND1O60716 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTNND1O60716 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.61■□□□□ 0.41
CTNND1O60716 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.61■□□□□ 0.41
CTNND1O60716 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC17.61■□□□□ 0.41
CTNND1O60716 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC17.61■□□□□ 0.41
CTNND1O60716 AC012618.1-201ENST00000461223 412 ntBASIC17.61■□□□□ 0.41
CTNND1O60716 TMEM198B-204ENST00000484016 896 ntBASIC17.61■□□□□ 0.41
CTNND1O60716 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC17.61■□□□□ 0.41
CTNND1O60716 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.61■□□□□ 0.41
CTNND1O60716 NUP210P1-202ENST00000504322 710 ntBASIC17.61■□□□□ 0.41
CTNND1O60716 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.61■□□□□ 0.41
CTNND1O60716 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC17.61■□□□□ 0.41
CTNND1O60716 MIR4722-201ENST00000578292 60 ntBASIC17.61■□□□□ 0.41
CTNND1O60716 MIR3907-201ENST00000579424 151 ntBASIC17.61■□□□□ 0.41
CTNND1O60716 AC008825.2-201ENST00000603374 718 ntBASIC17.61■□□□□ 0.41
CTNND1O60716 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC17.61■□□□□ 0.41
CTNND1O60716 AC079336.7-201ENST00000623428 1078 ntBASIC17.61■□□□□ 0.41
CTNND1O60716 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CTNND1O60716 AC128714.1-201ENST00000637035 887 ntBASIC17.61■□□□□ 0.41
CTNND1O60716 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CTNND1O60716 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTNND1O60716 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CTNND1O60716 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTNND1O60716 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTNND1O60716 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CTNND1O60716 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CTNND1O60716 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTNND1O60716 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.61■□□□□ 0.41
CTNND1O60716 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTNND1O60716 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTNND1O60716 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTNND1O60716 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTNND1O60716 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.61■□□□□ 0.41
CTNND1O60716 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTNND1O60716 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTNND1O60716 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CTNND1O60716 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CTNND1O60716 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.6■□□□□ 0.41
CTNND1O60716 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CTNND1O60716 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CTNND1O60716 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
CTNND1O60716 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTNND1O60716 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CTNND1O60716 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTNND1O60716 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTNND1O60716 AC105917.1-201ENST00000506637 2539 ntBASIC17.6■□□□□ 0.41
CTNND1O60716 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTNND1O60716 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.6■□□□□ 0.41
CTNND1O60716 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CTNND1O60716 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CTNND1O60716 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTNND1O60716 PRAL-201ENST00000624952 3286 ntBASIC17.6■□□□□ 0.41
CTNND1O60716 AC091046.1-201ENST00000331871 207 ntBASIC17.6■□□□□ 0.41
CTNND1O60716 RN7SKP230-201ENST00000365642 335 ntBASIC17.6■□□□□ 0.41
CTNND1O60716 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.6■□□□□ 0.41
CTNND1O60716 FXNP2-201ENST00000411625 547 ntBASIC17.6■□□□□ 0.41
CTNND1O60716 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC17.6■□□□□ 0.41
CTNND1O60716 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC17.6■□□□□ 0.41
CTNND1O60716 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC17.6■□□□□ 0.41
CTNND1O60716 RPL18P13-201ENST00000478088 569 ntBASIC17.6■□□□□ 0.41
CTNND1O60716 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC17.6■□□□□ 0.41
CTNND1O60716 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.6■□□□□ 0.41
CTNND1O60716 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTNND1O60716 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CTNND1O60716 E2F3P2-201ENST00000447755 1422 ntBASIC17.6■□□□□ 0.41
CTNND1O60716 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTNND1O60716 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTNND1O60716 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.6■□□□□ 0.41
CTNND1O60716 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CTNND1O60716 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTNND1O60716 AC020910.5-201ENST00000623668 1865 ntBASIC17.6■□□□□ 0.41
CTNND1O60716 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
CTNND1O60716 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.6■□□□□ 0.41
CTNND1O60716 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.6■□□□□ 0.41
CTNND1O60716 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTNND1O60716 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
CTNND1O60716 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTNND1O60716 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CTNND1O60716 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTNND1O60716 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTNND1O60716 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTNND1O60716 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTNND1O60716 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTNND1O60716 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.59■□□□□ 0.41
CTNND1O60716 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
CTNND1O60716 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CTNND1O60716 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.59■□□□□ 0.41
CTNND1O60716 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTNND1O60716 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTNND1O60716 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.59■□□□□ 0.41
CTNND1O60716 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CTNND1O60716 AL157791.1-201ENST00000553667 1699 ntBASIC17.59■□□□□ 0.41
CTNND1O60716 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTNND1O60716 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.59■□□□□ 0.41
CTNND1O60716 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CTNND1O60716 AL138725.1-201ENST00000407347 1314 ntBASIC17.59■□□□□ 0.41
CTNND1O60716 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms