Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
IDH3BO43837 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.05□□□□□ -0.16
IDH3BO43837 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
IDH3BO43837 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IDH3BO43837 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IDH3BO43837 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.05□□□□□ -0.16
IDH3BO43837 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.05□□□□□ -0.16
IDH3BO43837 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
IDH3BO43837 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IDH3BO43837 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IDH3BO43837 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
IDH3BO43837 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IDH3BO43837 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.05□□□□□ -0.16
IDH3BO43837 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.05□□□□□ -0.16
IDH3BO43837 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
IDH3BO43837 AL627223.1-201ENST00000416693 442 ntBASIC14.05□□□□□ -0.16
IDH3BO43837 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.05□□□□□ -0.16
IDH3BO43837 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
IDH3BO43837 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.05□□□□□ -0.16
IDH3BO43837 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.05□□□□□ -0.16
IDH3BO43837 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IDH3BO43837 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.05□□□□□ -0.16
IDH3BO43837 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.05□□□□□ -0.16
IDH3BO43837 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.05□□□□□ -0.16
IDH3BO43837 RN7SL828P-201ENST00000607615 303 ntBASIC14.05□□□□□ -0.16
IDH3BO43837 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
IDH3BO43837 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.05□□□□□ -0.16
IDH3BO43837 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
IDH3BO43837 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
IDH3BO43837 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
IDH3BO43837 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IDH3BO43837 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
IDH3BO43837 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IDH3BO43837 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IDH3BO43837 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IDH3BO43837 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
IDH3BO43837 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
IDH3BO43837 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IDH3BO43837 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
IDH3BO43837 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IDH3BO43837 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
IDH3BO43837 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
IDH3BO43837 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
IDH3BO43837 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
IDH3BO43837 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IDH3BO43837 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
IDH3BO43837 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IDH3BO43837 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
IDH3BO43837 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IDH3BO43837 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IDH3BO43837 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
IDH3BO43837 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IDH3BO43837 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IDH3BO43837 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
IDH3BO43837 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IDH3BO43837 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
IDH3BO43837 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
IDH3BO43837 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IDH3BO43837 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.04□□□□□ -0.16
IDH3BO43837 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IDH3BO43837 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IDH3BO43837 AC073869.1-201ENST00000415574 2762 ntBASIC14.04□□□□□ -0.16
IDH3BO43837 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IDH3BO43837 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
IDH3BO43837 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
IDH3BO43837 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IDH3BO43837 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
IDH3BO43837 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
IDH3BO43837 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.04□□□□□ -0.16
IDH3BO43837 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
IDH3BO43837 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
IDH3BO43837 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.04□□□□□ -0.16
IDH3BO43837 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
IDH3BO43837 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
IDH3BO43837 FAM8A3P-201ENST00000427218 844 ntBASIC14.04□□□□□ -0.16
IDH3BO43837 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.04□□□□□ -0.16
IDH3BO43837 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.04□□□□□ -0.16
IDH3BO43837 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
IDH3BO43837 ALG1L5P-201ENST00000482043 771 ntBASIC14.04□□□□□ -0.16
IDH3BO43837 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.04□□□□□ -0.16
IDH3BO43837 YBX1P5-201ENST00000509441 847 ntBASIC14.04□□□□□ -0.16
IDH3BO43837 POLD2P1-201ENST00000511220 997 ntBASIC14.04□□□□□ -0.16
IDH3BO43837 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.04□□□□□ -0.16
IDH3BO43837 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.04□□□□□ -0.16
IDH3BO43837 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.04□□□□□ -0.16
IDH3BO43837 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.04□□□□□ -0.16
IDH3BO43837 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
IDH3BO43837 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.04□□□□□ -0.16
IDH3BO43837 AL133215.2-201ENST00000609242 977 ntBASIC14.04□□□□□ -0.16
IDH3BO43837 AC003101.2-201ENST00000612557 442 ntBASIC14.04□□□□□ -0.16
IDH3BO43837 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.04□□□□□ -0.16
IDH3BO43837 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
IDH3BO43837 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
IDH3BO43837 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
IDH3BO43837 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
IDH3BO43837 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.04□□□□□ -0.16
IDH3BO43837 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IDH3BO43837 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
IDH3BO43837 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
IDH3BO43837 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms