Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.02■□□□□ 0.32
ACTN4O43707 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.02■□□□□ 0.32
ACTN4O43707 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.02■□□□□ 0.32
ACTN4O43707 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.02■□□□□ 0.32
ACTN4O43707 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.02■□□□□ 0.32
ACTN4O43707 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC17.02■□□□□ 0.32
ACTN4O43707 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ACTN4O43707 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.02■□□□□ 0.32
ACTN4O43707 AC120045.2-201ENST00000567334 178 ntBASIC17.02■□□□□ 0.32
ACTN4O43707 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.02■□□□□ 0.32
ACTN4O43707 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.02■□□□□ 0.32
ACTN4O43707 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.02■□□□□ 0.32
ACTN4O43707 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.02■□□□□ 0.32
ACTN4O43707 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.02■□□□□ 0.32
ACTN4O43707 AC099568.2-201ENST00000609194 695 ntBASIC17.02■□□□□ 0.32
ACTN4O43707 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
ACTN4O43707 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
ACTN4O43707 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ACTN4O43707 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.02■□□□□ 0.31
ACTN4O43707 SLC7A15P-201ENST00000424028 1363 ntBASIC17.02■□□□□ 0.31
ACTN4O43707 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ACTN4O43707 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
ACTN4O43707 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ACTN4O43707 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ACTN4O43707 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ACTN4O43707 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ACTN4O43707 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.01■□□□□ 0.31
ACTN4O43707 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ACTN4O43707 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ACTN4O43707 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ACTN4O43707 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC17.01■□□□□ 0.31
ACTN4O43707 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ACTN4O43707 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
ACTN4O43707 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ACTN4O43707 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.01■□□□□ 0.31
ACTN4O43707 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ACTN4O43707 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17.01■□□□□ 0.31
ACTN4O43707 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
ACTN4O43707 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
ACTN4O43707 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.01■□□□□ 0.31
ACTN4O43707 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ACTN4O43707 MEP1AP4-201ENST00000423244 1087 ntBASIC17.01■□□□□ 0.31
ACTN4O43707 SPTLC1P1-201ENST00000447199 261 ntBASIC17.01■□□□□ 0.31
ACTN4O43707 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.01■□□□□ 0.31
ACTN4O43707 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.01■□□□□ 0.31
ACTN4O43707 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.01■□□□□ 0.31
ACTN4O43707 AC124283.3-201ENST00000570869 594 ntBASIC17.01■□□□□ 0.31
ACTN4O43707 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.01■□□□□ 0.31
ACTN4O43707 SPDYE22P-201ENST00000582158 798 ntBASIC17.01■□□□□ 0.31
ACTN4O43707 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.01■□□□□ 0.31
ACTN4O43707 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
ACTN4O43707 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.01■□□□□ 0.31
ACTN4O43707 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC17.01■□□□□ 0.31
ACTN4O43707 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.01■□□□□ 0.31
ACTN4O43707 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.01■□□□□ 0.31
ACTN4O43707 KRT8P14-201ENST00000414254 1442 ntBASIC17.01■□□□□ 0.31
ACTN4O43707 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
ACTN4O43707 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ACTN4O43707 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ACTN4O43707 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
ACTN4O43707 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.01■□□□□ 0.31
ACTN4O43707 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.01■□□□□ 0.31
ACTN4O43707 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ACTN4O43707 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ACTN4O43707 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ACTN4O43707 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ACTN4O43707 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
ACTN4O43707 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ACTN4O43707 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ACTN4O43707 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.01■□□□□ 0.31
ACTN4O43707 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.01■□□□□ 0.31
ACTN4O43707 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.01■□□□□ 0.31
ACTN4O43707 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.01■□□□□ 0.31
ACTN4O43707 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ACTN4O43707 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.01■□□□□ 0.31
ACTN4O43707 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ACTN4O43707 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17■□□□□ 0.31
ACTN4O43707 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
ACTN4O43707 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ACTN4O43707 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
ACTN4O43707 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC17■□□□□ 0.31
ACTN4O43707 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ACTN4O43707 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ACTN4O43707 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC17■□□□□ 0.31
ACTN4O43707 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ACTN4O43707 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17■□□□□ 0.31
ACTN4O43707 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17■□□□□ 0.31
ACTN4O43707 PMS2P2-201ENST00000425039 1128 ntBASIC17■□□□□ 0.31
ACTN4O43707 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ACTN4O43707 RPL13AP25-201ENST00000484130 612 ntBASIC17■□□□□ 0.31
ACTN4O43707 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17■□□□□ 0.31
ACTN4O43707 AC093004.1-201ENST00000508850 424 ntBASIC17■□□□□ 0.31
ACTN4O43707 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17■□□□□ 0.31
ACTN4O43707 AC055876.2-201ENST00000531834 546 ntBASIC17■□□□□ 0.31
ACTN4O43707 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17■□□□□ 0.31
ACTN4O43707 DUX4L47-201ENST00000566374 394 ntBASIC17■□□□□ 0.31
ACTN4O43707 AC015802.1-201ENST00000588104 1449 ntBASIC17■□□□□ 0.31
ACTN4O43707 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC17■□□□□ 0.31
ACTN4O43707 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17■□□□□ 0.31
ACTN4O43707 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms