Protein–RNA interactions for Protein: O00192

ARVCF, Armadillo repeat protein deleted in velo-cardio-facial syndrome, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARVCFO00192 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
ARVCFO00192 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ARVCFO00192 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ARVCFO00192 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.42■□□□□ 0.22
ARVCFO00192 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ARVCFO00192 NCR3-202ENST00000376071 541 ntTSL 5 BASIC16.42■□□□□ 0.22
ARVCFO00192 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC16.42■□□□□ 0.22
ARVCFO00192 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.42■□□□□ 0.22
ARVCFO00192 CICP12-201ENST00000455801 843 ntBASIC16.42■□□□□ 0.22
ARVCFO00192 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC16.42■□□□□ 0.22
ARVCFO00192 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ARVCFO00192 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC16.42■□□□□ 0.22
ARVCFO00192 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC16.42■□□□□ 0.22
ARVCFO00192 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC16.42■□□□□ 0.22
ARVCFO00192 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC16.42■□□□□ 0.22
ARVCFO00192 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
ARVCFO00192 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
ARVCFO00192 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC16.42■□□□□ 0.22
ARVCFO00192 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
ARVCFO00192 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.42■□□□□ 0.22
ARVCFO00192 AL139384.1-201ENST00000612143 3047 ntBASIC16.42■□□□□ 0.22
ARVCFO00192 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ARVCFO00192 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
ARVCFO00192 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
ARVCFO00192 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
ARVCFO00192 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.42■□□□□ 0.22
ARVCFO00192 AC003102.2-201ENST00000589195 1469 ntBASIC16.42■□□□□ 0.22
ARVCFO00192 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
ARVCFO00192 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ARVCFO00192 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
ARVCFO00192 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
ARVCFO00192 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ARVCFO00192 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ARVCFO00192 AC105250.1-201ENST00000509378 2057 ntBASIC16.41■□□□□ 0.22
ARVCFO00192 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.41■□□□□ 0.22
ARVCFO00192 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ARVCFO00192 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ARVCFO00192 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
ARVCFO00192 AC144522.1-201ENST00000625111 1658 ntBASIC16.41■□□□□ 0.22
ARVCFO00192 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.41■□□□□ 0.22
ARVCFO00192 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ARVCFO00192 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ARVCFO00192 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ARVCFO00192 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ARVCFO00192 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC16.41■□□□□ 0.22
ARVCFO00192 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ARVCFO00192 TLE1P1-201ENST00000422965 589 ntBASIC16.41■□□□□ 0.22
ARVCFO00192 RPL13AP19-201ENST00000434320 584 ntBASIC16.41■□□□□ 0.22
ARVCFO00192 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC16.41■□□□□ 0.22
ARVCFO00192 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC16.41■□□□□ 0.22
ARVCFO00192 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC16.41■□□□□ 0.22
ARVCFO00192 AC130709.1-201ENST00000484779 1212 ntBASIC16.41■□□□□ 0.22
ARVCFO00192 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.41■□□□□ 0.22
ARVCFO00192 AC006122.1-201ENST00000493323 440 ntBASIC16.41■□□□□ 0.22
ARVCFO00192 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.41■□□□□ 0.22
ARVCFO00192 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC16.41■□□□□ 0.22
ARVCFO00192 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.41■□□□□ 0.22
ARVCFO00192 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.41■□□□□ 0.22
ARVCFO00192 BX088702.1-201ENST00000610784 235 ntBASIC16.41■□□□□ 0.22
ARVCFO00192 LINC01783-202ENST00000614408 828 ntBASIC16.41■□□□□ 0.22
ARVCFO00192 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.41■□□□□ 0.22
ARVCFO00192 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC16.41■□□□□ 0.22
ARVCFO00192 BX284668.2-205ENST00000619677 828 ntBASIC16.41■□□□□ 0.22
ARVCFO00192 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.41■□□□□ 0.22
ARVCFO00192 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ARVCFO00192 AC009084.3-201ENST00000623356 437 ntBASIC16.41■□□□□ 0.22
ARVCFO00192 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.41■□□□□ 0.22
ARVCFO00192 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.41■□□□□ 0.22
ARVCFO00192 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.41■□□□□ 0.22
ARVCFO00192 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ARVCFO00192 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ARVCFO00192 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.41■□□□□ 0.22
ARVCFO00192 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ARVCFO00192 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ARVCFO00192 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.41■□□□□ 0.22
ARVCFO00192 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
ARVCFO00192 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
ARVCFO00192 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.41■□□□□ 0.22
ARVCFO00192 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ARVCFO00192 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ARVCFO00192 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ARVCFO00192 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.41■□□□□ 0.22
ARVCFO00192 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC16.41■□□□□ 0.22
ARVCFO00192 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ARVCFO00192 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.41■□□□□ 0.22
ARVCFO00192 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ARVCFO00192 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARVCFO00192 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARVCFO00192 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ARVCFO00192 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.4■□□□□ 0.22
ARVCFO00192 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARVCFO00192 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ARVCFO00192 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARVCFO00192 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.4■□□□□ 0.22
ARVCFO00192 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARVCFO00192 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARVCFO00192 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARVCFO00192 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.4■□□□□ 0.22
ARVCFO00192 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
ARVCFO00192 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms